Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
MRPL55Q7Z7F7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL55Q7Z7F7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL55Q7Z7F7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL55Q7Z7F7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL55Q7Z7F7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC14.68□□□□□ -0.06
MRPL55Q7Z7F7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
MRPL55Q7Z7F7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL55Q7Z7F7 HYI-210ENST00000486909 905 ntTSL 5 BASIC14.68□□□□□ -0.06
MRPL55Q7Z7F7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC14.68□□□□□ -0.06
MRPL55Q7Z7F7 AC090877.2-201ENST00000558441 1738 ntBASIC14.68□□□□□ -0.06
MRPL55Q7Z7F7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
MRPL55Q7Z7F7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
MRPL55Q7Z7F7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPL55Q7Z7F7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL55Q7Z7F7 ABCB10P4-201ENST00000566803 2184 ntBASIC14.67□□□□□ -0.06
MRPL55Q7Z7F7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL55Q7Z7F7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
MRPL55Q7Z7F7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MRPL55Q7Z7F7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL55Q7Z7F7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
MRPL55Q7Z7F7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL55Q7Z7F7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
MRPL55Q7Z7F7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MRPL55Q7Z7F7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
MRPL55Q7Z7F7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL55Q7Z7F7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC14.67□□□□□ -0.06
MRPL55Q7Z7F7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPL55Q7Z7F7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 U85056.1-201ENST00000616429 682 ntBASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPL55Q7Z7F7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
MRPL55Q7Z7F7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL55Q7Z7F7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL55Q7Z7F7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL55Q7Z7F7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL55Q7Z7F7 AC129492.7-201ENST00000622992 756 ntBASIC14.64□□□□□ -0.07
MRPL55Q7Z7F7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL55Q7Z7F7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL55Q7Z7F7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MRPL55Q7Z7F7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL55Q7Z7F7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
MRPL55Q7Z7F7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MRPL55Q7Z7F7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
MRPL55Q7Z7F7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL55Q7Z7F7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL55Q7Z7F7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL55Q7Z7F7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL55Q7Z7F7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL55Q7Z7F7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL55Q7Z7F7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MRPL55Q7Z7F7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MRPL55Q7Z7F7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
MRPL55Q7Z7F7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MRPL55Q7Z7F7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MRPL55Q7Z7F7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC14.62□□□□□ -0.07
MRPL55Q7Z7F7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MRPL55Q7Z7F7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
MRPL55Q7Z7F7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC14.62□□□□□ -0.07
MRPL55Q7Z7F7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms