Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SSBP1Q04837 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.82□□□□□ -0.36
SSBP1Q04837 Z97205.2-201ENST00000564697 1639 ntBASIC12.82□□□□□ -0.36
SSBP1Q04837 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
SSBP1Q04837 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.82□□□□□ -0.36
SSBP1Q04837 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP1Q04837 IGHV3-62-201ENST00000520057 340 ntBASIC12.82□□□□□ -0.36
SSBP1Q04837 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP1Q04837 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.82□□□□□ -0.36
SSBP1Q04837 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.82□□□□□ -0.36
SSBP1Q04837 LINC01225-203ENST00000563550 1244 ntBASIC12.82□□□□□ -0.36
SSBP1Q04837 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.82□□□□□ -0.36
SSBP1Q04837 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 MIR6074-201ENST00000612054 107 ntBASIC12.82□□□□□ -0.36
SSBP1Q04837 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
SSBP1Q04837 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.82□□□□□ -0.36
SSBP1Q04837 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP1Q04837 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
SSBP1Q04837 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SSBP1Q04837 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP1Q04837 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
SSBP1Q04837 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.82□□□□□ -0.36
SSBP1Q04837 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.82□□□□□ -0.36
SSBP1Q04837 KRT8P12-202ENST00000472924 1397 ntBASIC12.81□□□□□ -0.36
SSBP1Q04837 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP1Q04837 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP1Q04837 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP1Q04837 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 PTENP1-202ENST00000532280 3996 ntBASIC12.81□□□□□ -0.36
SSBP1Q04837 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP1Q04837 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP1Q04837 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SSBP1Q04837 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SSBP1Q04837 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP1Q04837 AC074338.1-201ENST00000416825 156 ntBASIC12.81□□□□□ -0.36
SSBP1Q04837 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP1Q04837 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP1Q04837 AC004066.1-201ENST00000502488 802 ntBASIC12.81□□□□□ -0.36
SSBP1Q04837 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP1Q04837 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.81□□□□□ -0.36
SSBP1Q04837 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 AC243562.1-201ENST00000560672 389 ntBASIC12.81□□□□□ -0.36
SSBP1Q04837 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.81□□□□□ -0.36
SSBP1Q04837 AC105021.1-202ENST00000570572 669 ntBASIC12.81□□□□□ -0.36
SSBP1Q04837 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP1Q04837 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SSBP1Q04837 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SSBP1Q04837 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SSBP1Q04837 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SSBP1Q04837 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP1Q04837 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP1Q04837 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.81□□□□□ -0.36
SSBP1Q04837 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP1Q04837 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SSBP1Q04837 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.81□□□□□ -0.36
SSBP1Q04837 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
SSBP1Q04837 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
SSBP1Q04837 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SSBP1Q04837 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.8□□□□□ -0.36
SSBP1Q04837 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 AL356585.2-201ENST00000625078 2396 ntBASIC12.8□□□□□ -0.36
SSBP1Q04837 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SSBP1Q04837 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms