Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLPXO76031 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.85□□□□□ -0.19
CLPXO76031 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
CLPXO76031 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CLPXO76031 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
CLPXO76031 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.84□□□□□ -0.19
CLPXO76031 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.84□□□□□ -0.19
CLPXO76031 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CLPXO76031 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLPXO76031 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLPXO76031 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.84□□□□□ -0.19
CLPXO76031 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CLPXO76031 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLPXO76031 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.84□□□□□ -0.19
CLPXO76031 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 CXCL1P1-201ENST00000502804 216 ntBASIC13.84□□□□□ -0.19
CLPXO76031 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
CLPXO76031 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.84□□□□□ -0.19
CLPXO76031 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CLPXO76031 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.84□□□□□ -0.19
CLPXO76031 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.84□□□□□ -0.19
CLPXO76031 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.84□□□□□ -0.19
CLPXO76031 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLPXO76031 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.84□□□□□ -0.19
CLPXO76031 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
CLPXO76031 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
CLPXO76031 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLPXO76031 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLPXO76031 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.83□□□□□ -0.2
CLPXO76031 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CLPXO76031 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.83□□□□□ -0.2
CLPXO76031 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.83□□□□□ -0.2
CLPXO76031 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.83□□□□□ -0.2
CLPXO76031 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CLPXO76031 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.83□□□□□ -0.2
CLPXO76031 AC138969.3-201ENST00000546612 1459 ntBASIC13.83□□□□□ -0.2
CLPXO76031 AC138932.2-201ENST00000548268 1459 ntBASIC13.83□□□□□ -0.2
CLPXO76031 AC126755.4-201ENST00000549796 1459 ntBASIC13.83□□□□□ -0.2
CLPXO76031 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CLPXO76031 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CLPXO76031 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 RPL5P21-201ENST00000404620 815 ntBASIC13.83□□□□□ -0.2
CLPXO76031 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.83□□□□□ -0.2
CLPXO76031 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CLPXO76031 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.83□□□□□ -0.2
CLPXO76031 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.83□□□□□ -0.2
CLPXO76031 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 AC064836.3-201ENST00000607928 673 ntBASIC13.83□□□□□ -0.2
CLPXO76031 ACTL9-202ENST00000612068 1252 ntBASIC13.83□□□□□ -0.2
CLPXO76031 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.83□□□□□ -0.2
CLPXO76031 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.83□□□□□ -0.2
CLPXO76031 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CLPXO76031 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.83□□□□□ -0.2
CLPXO76031 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.83□□□□□ -0.2
CLPXO76031 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLPXO76031 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms