Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 AC011247.3-201ENST00000603297 438 ntBASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 BX088702.1-201ENST00000610784 235 ntBASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 AC138466.5-201ENST00000624002 808 ntBASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM43Q96BQ3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 NFIC-211ENST00000641145 8399 ntBASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 NHP2-202ENST00000314397 599 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 HLA-DMA-203ENST00000395305 777 ntBASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 BCAS2P2-201ENST00000425064 674 ntBASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 AL118516.1-201ENST00000564152 670 ntBASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM43Q96BQ3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 KRT18P36-201ENST00000411618 1276 ntBASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM43Q96BQ3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRIM43Q96BQ3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM43Q96BQ3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms