RNA–Protein interactions for RNA: ENST00000592168.5

HKR1-225, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

TSL 4 BASIC

Gene HKR1, Length 566 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-225ENST00000592168 NISCHQ9Y2I1 1504 aa33.84■■■■□ 3.01
HKR1-225ENST00000592168 ABCC9O60706 1549 aa30.84■■■□□ 2.53
HKR1-225ENST00000592168 CCDC180Q9P1Z9 1646 aa30.45■■■□□ 2.47
HKR1-225ENST00000592168 DNAJC5BQ9UF47 199 aa29.2■■■□□ 2.26
HKR1-225ENST00000592168 RB1CC1Q8TDY2 1594 aa29.15■■■□□ 2.26
HKR1-225ENST00000592168 NACADO15069 1562 aa28.85■■■□□ 2.21
HKR1-225ENST00000592168 DCAF8L2P0C7V8 631 aa28.77■■■□□ 2.2
HKR1-225ENST00000592168 PABPN1Q86U42 306 aaKnown RBP eCLIP28.69■■■□□ 2.18
HKR1-225ENST00000592168 UNC13AQ9UPW8 1703 aa28.54■■■□□ 2.16
HKR1-225ENST00000592168 BICRAQ9NZM4 1560 aa28.35■■■□□ 2.13
HKR1-225ENST00000592168 MYO15BQ96JP2 1530 aa28.3■■■□□ 2.12
HKR1-225ENST00000592168 ZCCHC6Q5VYS8 1495 aaKnown RBP27.98■■■□□ 2.07
HKR1-225ENST00000592168 DCAF1Q9Y4B6 1507 aa27.86■■■□□ 2.05
HKR1-225ENST00000592168 SCRIBQ14160 1630 aa27.83■■■□□ 2.05
HKR1-225ENST00000592168 SHROOM4Q9ULL8 1493 aa27.82■■■□□ 2.04
HKR1-225ENST00000592168 CC2D2AQ9P2K1 1620 aa27.81■■■□□ 2.04
HKR1-225ENST00000592168 CECR2Q9BXF3 1484 aa27.77■■■□□ 2.04
HKR1-225ENST00000592168 EIF4G1Q04637 1599 aaKnown RBP27.67■■■□□ 2.02
HKR1-225ENST00000592168 DNAJC5Q9H3Z4 198 aa26.96■■□□□ 1.91
HKR1-225ENST00000592168 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
HKR1-225ENST00000592168 ERCC6Q03468 1493 aa26.62■■□□□ 1.85
HKR1-225ENST00000592168 CUX2O14529 1486 aa26.61■■□□□ 1.85
HKR1-225ENST00000592168 ATAD2BQ9ULI0 1458 aa26.56■■□□□ 1.84
HKR1-225ENST00000592168 SMARCA4P51532 1647 aa26.47■■□□□ 1.83
HKR1-225ENST00000592168 SMARCA2P51531 1590 aa26.44■■□□□ 1.82
HKR1-225ENST00000592168 HMGXB3Q12766 1538 aa26.43■■□□□ 1.82
HKR1-225ENST00000592168 NESP48681 1621 aa26.42■■□□□ 1.82
HKR1-225ENST00000592168 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
HKR1-225ENST00000592168 BAZ1AQ9NRL2 1556 aaPredicted RBP26.26■■□□□ 1.79
HKR1-225ENST00000592168 THOC2Q8NI27 1593 aaKnown RBP26.17■■□□□ 1.78
HKR1-225ENST00000592168 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
HKR1-225ENST00000592168 MROH2BQ7Z745 1585 aa26.11■■□□□ 1.77
HKR1-225ENST00000592168 LAMC3Q9Y6N6 1575 aa26.1■■□□□ 1.77
HKR1-225ENST00000592168 KIF21AQ7Z4S6 1674 aa26.05■■□□□ 1.76
HKR1-225ENST00000592168 PDS5BQ9NTI5 1447 aa25.96■■□□□ 1.75
HKR1-225ENST00000592168 CADPSQ9ULU8 1353 aa25.84■■□□□ 1.73
HKR1-225ENST00000592168 WIZO95785 1651 aa25.79■■□□□ 1.72
HKR1-225ENST00000592168 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
HKR1-225ENST00000592168 TRIM41Q8WV44 630 aa25.75■■□□□ 1.71
HKR1-225ENST00000592168 WDR62O43379 1518 aa25.72■■□□□ 1.71
HKR1-225ENST00000592168 CEP164Q9UPV0 1460 aa25.62■■□□□ 1.69
HKR1-225ENST00000592168 FANCD2Q9BXW9 1451 aa25.58■■□□□ 1.69
HKR1-225ENST00000592168 CFTRP13569 1480 aa25.48■■□□□ 1.67
HKR1-225ENST00000592168 RSF1Q96T23 1441 aaPredicted RBP25.44■■□□□ 1.66
HKR1-225ENST00000592168 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
HKR1-225ENST00000592168 TOP2AP11388 1531 aaKnown RBP25.4■■□□□ 1.66
HKR1-225ENST00000592168 OSCARQ8IYS5 282 aa25.36■■□□□ 1.65
HKR1-225ENST00000592168 PRDM2Q13029 1718 aa25.2■■□□□ 1.62
HKR1-225ENST00000592168 ZNF608Q9ULD9 1512 aaPredicted RBP25.16■■□□□ 1.62
HKR1-225ENST00000592168 CCDC88BA6NC98 1476 aa25.14■■□□□ 1.61
HKR1-225ENST00000592168 RIMBP3CA6NJZ7 1639 aa25.12■■□□□ 1.61
HKR1-225ENST00000592168 RIMBP3BA6NNM3 1639 aa25.12■■□□□ 1.61
HKR1-225ENST00000592168 RIMBP3Q9UFD9 1639 aa25.12■■□□□ 1.61
HKR1-225ENST00000592168 IFT140Q96RY7 1462 aa25.1■■□□□ 1.61
HKR1-225ENST00000592168 TOPBP1Q92547 1522 aa25.06■■□□□ 1.6
HKR1-225ENST00000592168 ARHGEF11O15085 1522 aa25■■□□□ 1.59
HKR1-225ENST00000592168 EIF4G3O43432 1585 aaKnown RBP24.98■■□□□ 1.59
HKR1-225ENST00000592168 DNMBPQ6XZF7 1577 aa24.93■■□□□ 1.58
HKR1-225ENST00000592168 ABCC8Q09428 1581 aa24.91■■□□□ 1.58
HKR1-225ENST00000592168 AQRO60306 1485 aaKnown RBP eCLIP24.89■■□□□ 1.57
HKR1-225ENST00000592168 CHD1O14646 1710 aa24.86■■□□□ 1.57
HKR1-225ENST00000592168 TARBP1Q13395 1621 aaKnown RBP24.86■■□□□ 1.57
HKR1-225ENST00000592168 CYB5RLQ6IPT4 315 aa24.85■■□□□ 1.57
HKR1-225ENST00000592168 FBLN2P98095 1184 aa24.8■■□□□ 1.56
HKR1-225ENST00000592168 POLA1P09884 1462 aaPredicted RBP24.79■■□□□ 1.56
HKR1-225ENST00000592168 RAD54L2Q9Y4B4 1467 aa24.75■■□□□ 1.55
HKR1-225ENST00000592168 ARAP1Q96P48 1450 aa24.74■■□□□ 1.55
HKR1-225ENST00000592168 TDRD9Q8NDG6 1382 aaKnown RBP24.68■■□□□ 1.54
HKR1-225ENST00000592168 TRHP20396 242 aaPredicted RBP24.68■■□□□ 1.54
HKR1-225ENST00000592168 SOGA1O94964 1423 aa24.67■■□□□ 1.54
HKR1-225ENST00000592168 SNAPC4Q5SXM2 1469 aa24.62■■□□□ 1.53
HKR1-225ENST00000592168 FGD5Q6ZNL6 1462 aa24.6■■□□□ 1.53
HKR1-225ENST00000592168 CUX1P39880 1505 aa24.54■■□□□ 1.52
HKR1-225ENST00000592168 CLASP1Q7Z460 1538 aa24.54■■□□□ 1.52
HKR1-225ENST00000592168 CHMP7Q8WUX9 453 aaPredicted RBP24.52■■□□□ 1.52
HKR1-225ENST00000592168 WDR97A6NE52 1622 aa24.5■■□□□ 1.51
HKR1-225ENST00000592168 SYNJ1O43426 1573 aa24.49■■□□□ 1.51
HKR1-225ENST00000592168 MAGI1Q96QZ7 1491 aaPredicted RBP24.48■■□□□ 1.51
HKR1-225ENST00000592168 GRIN2BQ13224 1484 aa24.47■■□□□ 1.51
HKR1-225ENST00000592168 SYNJ2O15056 1496 aa24.42■■□□□ 1.5
HKR1-225ENST00000592168 PBRM1Q86U86 1689 aa24.38■■□□□ 1.49
HKR1-225ENST00000592168 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
HKR1-225ENST00000592168 ABCA5Q8WWZ7 1642 aa24.28■■□□□ 1.48
HKR1-225ENST00000592168 ABCA10Q8WWZ4 1543 aa24.27■■□□□ 1.48
HKR1-225ENST00000592168 ERCC6L2Q5T890 1561 aa24.2■■□□□ 1.47
HKR1-225ENST00000592168 GRIN2AQ12879 1464 aa24.17■■□□□ 1.46
HKR1-225ENST00000592168 SUPT5HO00267 1087 aaKnown RBP24.16■■□□□ 1.46
HKR1-225ENST00000592168 AEBP2Q6ZN18 517 aaPredicted RBP24.15■■□□□ 1.46
HKR1-225ENST00000592168 ADAMTS12P58397 1594 aa24.13■■□□□ 1.45
HKR1-225ENST00000592168 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
HKR1-225ENST00000592168 WRNQ14191 1432 aaPredicted RBP eCLIP24.11■■□□□ 1.45
HKR1-225ENST00000592168 NUP160Q12769 1436 aa24.08■■□□□ 1.44
HKR1-225ENST00000592168 BIVM-ERCC5R4GMW8 1640 aa24.04■■□□□ 1.44
HKR1-225ENST00000592168 TOP2BQ02880 1626 aa24.03■■□□□ 1.44
HKR1-225ENST00000592168 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
HKR1-225ENST00000592168 SHROOM2Q13796 1616 aa24.01■■□□□ 1.43
HKR1-225ENST00000592168 ERICH3Q5RHP9 1530 aa23.94■■□□□ 1.42
HKR1-225ENST00000592168 PRG4Q92954 1404 aaPredicted RBP23.91■■□□□ 1.42
HKR1-225ENST00000592168 KIF13AQ9H1H9 1805 aa23.87■■□□□ 1.41
HKR1-225ENST00000592168 JPH4Q96JJ6 628 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms