Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.69■□□□□ 0.1
CD48P09326 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CD48P09326 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.69■□□□□ 0.1
CD48P09326 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 AC104581.4-201ENST00000623126 3052 ntBASIC15.69■□□□□ 0.1
CD48P09326 AC005089.1-201ENST00000619486 2241 ntBASIC15.69■□□□□ 0.1
CD48P09326 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CD48P09326 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.69■□□□□ 0.1
CD48P09326 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CD48P09326 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CD48P09326 CICP4-201ENST00000447359 2812 ntBASIC15.69■□□□□ 0.1
CD48P09326 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.69■□□□□ 0.1
CD48P09326 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CD48P09326 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.69■□□□□ 0.1
CD48P09326 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.69■□□□□ 0.1
CD48P09326 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.69■□□□□ 0.1
CD48P09326 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CD48P09326 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CD48P09326 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.68■□□□□ 0.1
CD48P09326 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.68■□□□□ 0.1
CD48P09326 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.68■□□□□ 0.1
CD48P09326 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.68■□□□□ 0.1
CD48P09326 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CD48P09326 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CD48P09326 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CD48P09326 AC055811.4-201ENST00000624039 1754 ntBASIC15.68■□□□□ 0.1
CD48P09326 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 DGCR5-201ENST00000399539 862 ntBASIC15.68■□□□□ 0.1
CD48P09326 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.68■□□□□ 0.1
CD48P09326 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.68■□□□□ 0.1
CD48P09326 HMGN1P19-201ENST00000436976 333 ntBASIC15.68■□□□□ 0.1
CD48P09326 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.68■□□□□ 0.1
CD48P09326 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.68■□□□□ 0.1
CD48P09326 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.68■□□□□ 0.1
CD48P09326 AC140912.1-201ENST00000577171 1054 ntBASIC15.68■□□□□ 0.1
CD48P09326 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
CD48P09326 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CD48P09326 MSTO2P-201ENST00000314835 1709 ntBASIC15.68■□□□□ 0.1
CD48P09326 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.68■□□□□ 0.1
CD48P09326 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CD48P09326 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CD48P09326 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 AC018665.1-201ENST00000622927 1362 ntBASIC15.67■□□□□ 0.1
CD48P09326 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.67■□□□□ 0.1
CD48P09326 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CD48P09326 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.67■□□□□ 0.1
CD48P09326 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.67■□□□□ 0.1
CD48P09326 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CD48P09326 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.67■□□□□ 0.1
CD48P09326 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.67■□□□□ 0.1
CD48P09326 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CD48P09326 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.67■□□□□ 0.1
CD48P09326 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CD48P09326 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CD48P09326 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.67■□□□□ 0.1
CD48P09326 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.67■□□□□ 0.1
CD48P09326 AC063926.3-201ENST00000624734 5658 ntBASIC15.67■□□□□ 0.1
CD48P09326 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CD48P09326 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms