Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.64□□□□□ -0.39
CTSDP07339 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CTSDP07339 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CTSDP07339 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CTSDP07339 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.64□□□□□ -0.39
CTSDP07339 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.64□□□□□ -0.39
CTSDP07339 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CTSDP07339 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CTSDP07339 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.63□□□□□ -0.39
CTSDP07339 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CTSDP07339 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.63□□□□□ -0.39
CTSDP07339 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CTSDP07339 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CTSDP07339 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.63□□□□□ -0.39
CTSDP07339 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.63□□□□□ -0.39
CTSDP07339 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.63□□□□□ -0.39
CTSDP07339 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 MIR574-201ENST00000385209 96 ntBASIC12.63□□□□□ -0.39
CTSDP07339 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.63□□□□□ -0.39
CTSDP07339 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.63□□□□□ -0.39
CTSDP07339 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.63□□□□□ -0.39
CTSDP07339 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CTSDP07339 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.63□□□□□ -0.39
CTSDP07339 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.63□□□□□ -0.39
CTSDP07339 POLD2P1-201ENST00000511220 997 ntBASIC12.63□□□□□ -0.39
CTSDP07339 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 SAMD11P1-201ENST00000571429 661 ntBASIC12.63□□□□□ -0.39
CTSDP07339 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.63□□□□□ -0.39
CTSDP07339 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.63□□□□□ -0.39
CTSDP07339 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.63□□□□□ -0.39
CTSDP07339 AL359183.1-201ENST00000623796 2132 ntBASIC12.63□□□□□ -0.39
CTSDP07339 AC089987.1-201ENST00000551654 2209 ntBASIC12.63□□□□□ -0.39
CTSDP07339 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CTSDP07339 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.63□□□□□ -0.39
CTSDP07339 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.63□□□□□ -0.39
CTSDP07339 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CTSDP07339 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.63□□□□□ -0.39
CTSDP07339 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.63□□□□□ -0.39
CTSDP07339 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CTSDP07339 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CTSDP07339 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.62□□□□□ -0.39
CTSDP07339 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.62□□□□□ -0.39
CTSDP07339 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.62□□□□□ -0.39
CTSDP07339 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CTSDP07339 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.62□□□□□ -0.39
CTSDP07339 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.62□□□□□ -0.39
CTSDP07339 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CTSDP07339 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CTSDP07339 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CTSDP07339 AP000347.1-202ENST00000435868 847 ntBASIC12.62□□□□□ -0.39
CTSDP07339 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.62□□□□□ -0.39
CTSDP07339 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.62□□□□□ -0.39
CTSDP07339 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.62□□□□□ -0.39
CTSDP07339 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.62□□□□□ -0.39
CTSDP07339 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CTSDP07339 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.62□□□□□ -0.39
CTSDP07339 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.62□□□□□ -0.39
CTSDP07339 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.62□□□□□ -0.39
CTSDP07339 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CTSDP07339 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CTSDP07339 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms