Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HLA-AP01891 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
HLA-AP01891 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-AP01891 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-AP01891 AL731571.1-201ENST00000617058 5428 ntBASIC12.9□□□□□ -0.34
HLA-AP01891 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-AP01891 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-AP01891 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-AP01891 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.9□□□□□ -0.34
HLA-AP01891 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-AP01891 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-AP01891 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-AP01891 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.9□□□□□ -0.34
HLA-AP01891 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.9□□□□□ -0.34
HLA-AP01891 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HLA-AP01891 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
HLA-AP01891 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
HLA-AP01891 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC12.9□□□□□ -0.34
HLA-AP01891 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-AP01891 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HLA-AP01891 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.9□□□□□ -0.34
HLA-AP01891 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-AP01891 AC023141.13-201ENST00000604991 943 ntBASIC12.9□□□□□ -0.34
HLA-AP01891 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.9□□□□□ -0.34
HLA-AP01891 AL513190.1-201ENST00000621254 727 ntBASIC12.9□□□□□ -0.34
HLA-AP01891 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-AP01891 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-AP01891 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.9□□□□□ -0.34
HLA-AP01891 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-AP01891 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-AP01891 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-AP01891 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-AP01891 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-AP01891 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-AP01891 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-AP01891 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HLA-AP01891 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
HLA-AP01891 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.9□□□□□ -0.35
HLA-AP01891 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HLA-AP01891 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 AC055811.4-201ENST00000624039 1754 ntBASIC12.89□□□□□ -0.35
HLA-AP01891 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HLA-AP01891 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
HLA-AP01891 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HLA-AP01891 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-AP01891 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-AP01891 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
HLA-AP01891 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-AP01891 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.89□□□□□ -0.35
HLA-AP01891 AC023274.1-201ENST00000418278 595 ntBASIC12.89□□□□□ -0.35
HLA-AP01891 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-AP01891 AC098859.1-201ENST00000502915 1238 ntBASIC12.89□□□□□ -0.35
HLA-AP01891 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-AP01891 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.89□□□□□ -0.35
HLA-AP01891 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-AP01891 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
HLA-AP01891 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.89□□□□□ -0.35
HLA-AP01891 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.89□□□□□ -0.35
HLA-AP01891 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.89□□□□□ -0.35
HLA-AP01891 AC097359.3-201ENST00000603982 1210 ntBASIC12.89□□□□□ -0.35
HLA-AP01891 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
HLA-AP01891 AC092865.6-201ENST00000642101 219 ntBASIC12.89□□□□□ -0.35
HLA-AP01891 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-AP01891 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.89□□□□□ -0.35
HLA-AP01891 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
HLA-AP01891 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
HLA-AP01891 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HLA-AP01891 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HLA-AP01891 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.89□□□□□ -0.35
HLA-AP01891 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
HLA-AP01891 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HLA-AP01891 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
HLA-AP01891 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
HLA-AP01891 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms