Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 ADH5P3-201ENST00000433842 1137 ntBASIC14.54□□□□□ -0.08
CLOCKO15516 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
CLOCKO15516 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
CLOCKO15516 EEF1DP4-201ENST00000446006 880 ntBASIC14.54□□□□□ -0.08
CLOCKO15516 AC079140.1-201ENST00000508039 487 ntBASIC14.54□□□□□ -0.08
CLOCKO15516 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.54□□□□□ -0.08
CLOCKO15516 IGHV3-62-201ENST00000520057 340 ntBASIC14.54□□□□□ -0.08
CLOCKO15516 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CLOCKO15516 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CLOCKO15516 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
CLOCKO15516 HNRNPUP1-201ENST00000554987 333 ntBASIC14.54□□□□□ -0.08
CLOCKO15516 AL135744.1-201ENST00000565098 629 ntBASIC14.54□□□□□ -0.08
CLOCKO15516 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.54□□□□□ -0.08
CLOCKO15516 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.54□□□□□ -0.08
CLOCKO15516 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.54□□□□□ -0.08
CLOCKO15516 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 AKAP8P1-201ENST00000434743 1349 ntBASIC14.54□□□□□ -0.08
CLOCKO15516 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.54□□□□□ -0.08
CLOCKO15516 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 AC084364.1-201ENST00000551967 1556 ntBASIC14.54□□□□□ -0.08
CLOCKO15516 AL359881.3-201ENST00000602640 1721 ntBASIC14.54□□□□□ -0.08
CLOCKO15516 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.54□□□□□ -0.08
CLOCKO15516 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CLOCKO15516 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CLOCKO15516 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLOCKO15516 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLOCKO15516 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.53□□□□□ -0.08
CLOCKO15516 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CLOCKO15516 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.53□□□□□ -0.08
CLOCKO15516 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.53□□□□□ -0.08
CLOCKO15516 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CLOCKO15516 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.53□□□□□ -0.08
CLOCKO15516 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CLOCKO15516 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CLOCKO15516 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.53□□□□□ -0.08
CLOCKO15516 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.53□□□□□ -0.08
CLOCKO15516 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.53□□□□□ -0.08
CLOCKO15516 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.53□□□□□ -0.08
CLOCKO15516 AL627223.1-201ENST00000416693 442 ntBASIC14.53□□□□□ -0.08
CLOCKO15516 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.53□□□□□ -0.08
CLOCKO15516 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.53□□□□□ -0.08
CLOCKO15516 FAM86GP-201ENST00000448322 971 ntBASIC14.53□□□□□ -0.08
CLOCKO15516 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.53□□□□□ -0.08
CLOCKO15516 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.53□□□□□ -0.08
CLOCKO15516 AL138918.1-201ENST00000568306 659 ntBASIC14.53□□□□□ -0.08
CLOCKO15516 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.53□□□□□ -0.08
CLOCKO15516 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.53□□□□□ -0.08
CLOCKO15516 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.53□□□□□ -0.08
CLOCKO15516 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.53□□□□□ -0.08
CLOCKO15516 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.53□□□□□ -0.08
CLOCKO15516 AC093512.1-201ENST00000617969 520 ntBASIC14.53□□□□□ -0.08
CLOCKO15516 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLOCKO15516 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.53□□□□□ -0.08
CLOCKO15516 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.53□□□□□ -0.08
CLOCKO15516 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CLOCKO15516 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.53□□□□□ -0.08
CLOCKO15516 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.53□□□□□ -0.08
CLOCKO15516 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.53□□□□□ -0.08
CLOCKO15516 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.53□□□□□ -0.08
CLOCKO15516 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CLOCKO15516 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.53□□□□□ -0.08
CLOCKO15516 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLOCKO15516 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLOCKO15516 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CLOCKO15516 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLOCKO15516 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLOCKO15516 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CLOCKO15516 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLOCKO15516 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLOCKO15516 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.52□□□□□ -0.08
CLOCKO15516 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.52□□□□□ -0.08
CLOCKO15516 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLOCKO15516 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms