Protein–RNA interactions for Protein: Q9BSG5

RTBDN, Retbindin, humanhuman

Predicted RBP Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDNQ9BSG5 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 PTENP1-202ENST00000532280 3996 ntBASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
RTBDNQ9BSG5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 KRT8P22-201ENST00000562317 1415 ntBASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 INE2-201ENST00000630399 1874 ntBASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 KRT8P12-202ENST00000472924 1397 ntBASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 AC004870.1-201ENST00000315132 882 ntBASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 FAAHP1-202ENST00000446499 1238 ntBASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 TMEM198B-204ENST00000484016 896 ntBASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 KRT18P56-201ENST00000507275 550 ntBASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 AL360270.3-201ENST00000609118 1348 ntBASIC12.62□□□□□ -0.39
RTBDNQ9BSG5 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 COL6A4P2-202ENST00000504443 2753 ntBASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 AC027612.1-201ENST00000445234 2395 ntBASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 FAM58CP-201ENST00000435741 640 ntBASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
RTBDNQ9BSG5 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms