Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC01559Q495D7 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC01559Q495D7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
LINC01559Q495D7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
LINC01559Q495D7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC01559Q495D7 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC01559Q495D7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
LINC01559Q495D7 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
LINC01559Q495D7 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC01559Q495D7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 MTCO1P4-201ENST00000520516 1409 ntBASIC11.68□□□□□ -0.54
LINC01559Q495D7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC01559Q495D7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC01559Q495D7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01559Q495D7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
LINC01559Q495D7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC01559Q495D7 WASH3P-207ENST00000560956 1394 ntBASIC11.67□□□□□ -0.54
LINC01559Q495D7 FO538757.1-201ENST00000623083 1397 ntBASIC11.67□□□□□ -0.54
LINC01559Q495D7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 AC104581.4-201ENST00000623126 3052 ntBASIC11.67□□□□□ -0.54
LINC01559Q495D7 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 ARHGDIB-201ENST00000228945 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 SIRPB3P-201ENST00000340424 1216 ntBASIC11.67□□□□□ -0.54
LINC01559Q495D7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 USP9YP28-201ENST00000435142 589 ntBASIC11.67□□□□□ -0.54
LINC01559Q495D7 AP000534.1-201ENST00000444162 1294 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 CISD2-202ENST00000503643 808 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.67□□□□□ -0.54
LINC01559Q495D7 Y_RNA.717-201ENST00000517106 92 ntBASIC11.67□□□□□ -0.54
LINC01559Q495D7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 AC005229.3-201ENST00000603438 323 ntBASIC11.67□□□□□ -0.54
LINC01559Q495D7 AL121912.1-201ENST00000603683 238 ntBASIC11.67□□□□□ -0.54
LINC01559Q495D7 AC009974.1-201ENST00000608881 455 ntBASIC11.67□□□□□ -0.54
LINC01559Q495D7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 SPTSSB-204ENST00000617024 1292 ntBASIC11.67□□□□□ -0.54
LINC01559Q495D7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 HVCN1-209ENST00000620084 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01559Q495D7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
LINC01559Q495D7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01559Q495D7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
LINC01559Q495D7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
LINC01559Q495D7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.66□□□□□ -0.54
LINC01559Q495D7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
LINC01559Q495D7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms