Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT4P19013 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
KRT4P19013 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
KRT4P19013 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
KRT4P19013 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KRT4P19013 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.32■□□□□ 0.04
KRT4P19013 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KRT4P19013 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KRT4P19013 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
KRT4P19013 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KRT4P19013 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT4P19013 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.32■□□□□ 0.04
KRT4P19013 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
KRT4P19013 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
KRT4P19013 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KRT4P19013 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KRT4P19013 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.32■□□□□ 0.04
KRT4P19013 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT4P19013 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT4P19013 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.32■□□□□ 0.04
KRT4P19013 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.32■□□□□ 0.04
KRT4P19013 RN7SL828P-201ENST00000607615 303 ntBASIC15.32■□□□□ 0.04
KRT4P19013 AC003101.2-201ENST00000612557 442 ntBASIC15.32■□□□□ 0.04
KRT4P19013 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
KRT4P19013 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 LILRP1-201ENST00000444199 1370 ntBASIC15.32■□□□□ 0.04
KRT4P19013 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
KRT4P19013 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
KRT4P19013 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.32■□□□□ 0.04
KRT4P19013 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 AL122018.1-201ENST00000446607 2310 ntBASIC15.32■□□□□ 0.04
KRT4P19013 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.32■□□□□ 0.04
KRT4P19013 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.32■□□□□ 0.04
KRT4P19013 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KRT4P19013 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KRT4P19013 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT4P19013 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 PTENP1-202ENST00000532280 3996 ntBASIC15.31■□□□□ 0.04
KRT4P19013 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT4P19013 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.31■□□□□ 0.04
KRT4P19013 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT4P19013 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KRT4P19013 MCCD1P2-201ENST00000423228 335 ntBASIC15.31■□□□□ 0.04
KRT4P19013 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT4P19013 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT4P19013 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT4P19013 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
KRT4P19013 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.31■□□□□ 0.04
KRT4P19013 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.31■□□□□ 0.04
KRT4P19013 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KRT4P19013 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
KRT4P19013 AC055811.4-201ENST00000624039 1754 ntBASIC15.31■□□□□ 0.04
KRT4P19013 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KRT4P19013 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
KRT4P19013 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT4P19013 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
KRT4P19013 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KRT4P19013 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.31■□□□□ 0.04
KRT4P19013 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
KRT4P19013 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT4P19013 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT4P19013 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT4P19013 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms