Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CDCA3Q99618 AL583805.1-201ENST00000391389 531 ntBASIC15.59■□□□□ 0.09
CDCA3Q99618 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 AC097065.1-201ENST00000425737 517 ntBASIC15.59■□□□□ 0.09
CDCA3Q99618 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CDCA3Q99618 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.59■□□□□ 0.09
CDCA3Q99618 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.59■□□□□ 0.09
CDCA3Q99618 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CDCA3Q99618 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CDCA3Q99618 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.59■□□□□ 0.09
CDCA3Q99618 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.59■□□□□ 0.09
CDCA3Q99618 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CDCA3Q99618 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
CDCA3Q99618 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.59■□□□□ 0.09
CDCA3Q99618 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.59■□□□□ 0.09
CDCA3Q99618 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CDCA3Q99618 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CDCA3Q99618 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.59■□□□□ 0.09
CDCA3Q99618 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.58■□□□□ 0.09
CDCA3Q99618 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDCA3Q99618 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDCA3Q99618 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDCA3Q99618 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDCA3Q99618 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
CDCA3Q99618 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
CDCA3Q99618 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDCA3Q99618 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.58■□□□□ 0.08
CDCA3Q99618 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.58■□□□□ 0.08
CDCA3Q99618 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDCA3Q99618 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDCA3Q99618 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.58■□□□□ 0.08
CDCA3Q99618 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.58■□□□□ 0.08
CDCA3Q99618 RPL13AP19-201ENST00000434320 584 ntBASIC15.58■□□□□ 0.08
CDCA3Q99618 XBP1P1-201ENST00000436573 652 ntBASIC15.58■□□□□ 0.08
CDCA3Q99618 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDCA3Q99618 DUTP3-201ENST00000450025 415 ntBASIC15.58■□□□□ 0.08
CDCA3Q99618 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.58■□□□□ 0.08
CDCA3Q99618 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CDCA3Q99618 RBM8B-201ENST00000555532 525 ntBASIC15.58■□□□□ 0.08
CDCA3Q99618 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDCA3Q99618 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.58■□□□□ 0.08
CDCA3Q99618 AC092299.1-201ENST00000632679 757 ntBASIC15.58■□□□□ 0.08
CDCA3Q99618 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDCA3Q99618 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
CDCA3Q99618 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CDCA3Q99618 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDCA3Q99618 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDCA3Q99618 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDCA3Q99618 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.58■□□□□ 0.08
CDCA3Q99618 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDCA3Q99618 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.58■□□□□ 0.08
CDCA3Q99618 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDCA3Q99618 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.58■□□□□ 0.08
CDCA3Q99618 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.58■□□□□ 0.08
CDCA3Q99618 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.58■□□□□ 0.08
CDCA3Q99618 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CDCA3Q99618 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDCA3Q99618 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.58■□□□□ 0.08
CDCA3Q99618 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.57■□□□□ 0.08
CDCA3Q99618 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.57■□□□□ 0.08
CDCA3Q99618 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDCA3Q99618 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CDCA3Q99618 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.57■□□□□ 0.08
CDCA3Q99618 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDCA3Q99618 MIR557-201ENST00000385239 98 ntBASIC15.57■□□□□ 0.08
CDCA3Q99618 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 BANF1P3-201ENST00000412556 261 ntBASIC15.57■□□□□ 0.08
CDCA3Q99618 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDCA3Q99618 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.57■□□□□ 0.08
CDCA3Q99618 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.57■□□□□ 0.08
CDCA3Q99618 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.57■□□□□ 0.08
CDCA3Q99618 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.57■□□□□ 0.08
CDCA3Q99618 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.57■□□□□ 0.08
CDCA3Q99618 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.57■□□□□ 0.08
CDCA3Q99618 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.57■□□□□ 0.08
CDCA3Q99618 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.57■□□□□ 0.08
CDCA3Q99618 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms