Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.79■□□□□ 0.76
NBPF4Q96M43 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NBPF4Q96M43 OR6D1P-203ENST00000641209 4860 ntBASIC19.79■□□□□ 0.76
NBPF4Q96M43 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NBPF4Q96M43 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.79■□□□□ 0.76
NBPF4Q96M43 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC19.78■□□□□ 0.76
NBPF4Q96M43 AC069218.1-201ENST00000435269 762 ntBASIC19.78■□□□□ 0.76
NBPF4Q96M43 AC012441.2-201ENST00000444843 739 ntBASIC19.78■□□□□ 0.76
NBPF4Q96M43 AC006335.1-201ENST00000445200 547 ntBASIC19.78■□□□□ 0.76
NBPF4Q96M43 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC19.78■□□□□ 0.76
NBPF4Q96M43 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC19.78■□□□□ 0.76
NBPF4Q96M43 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC19.78■□□□□ 0.76
NBPF4Q96M43 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC19.78■□□□□ 0.76
NBPF4Q96M43 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC19.78■□□□□ 0.76
NBPF4Q96M43 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
NBPF4Q96M43 AC242376.1-201ENST00000559033 726 ntBASIC19.78■□□□□ 0.76
NBPF4Q96M43 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.78■□□□□ 0.76
NBPF4Q96M43 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NBPF4Q96M43 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.78■□□□□ 0.76
NBPF4Q96M43 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
NBPF4Q96M43 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.78■□□□□ 0.76
NBPF4Q96M43 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC19.78■□□□□ 0.76
NBPF4Q96M43 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NBPF4Q96M43 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NBPF4Q96M43 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NBPF4Q96M43 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.77■□□□□ 0.76
NBPF4Q96M43 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC19.77■□□□□ 0.76
NBPF4Q96M43 AC092978.1-202ENST00000637590 1327 ntBASIC19.77■□□□□ 0.76
NBPF4Q96M43 AC087481.3-201ENST00000602886 1894 ntBASIC19.77■□□□□ 0.76
NBPF4Q96M43 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NBPF4Q96M43 C18orf15-201ENST00000623680 2534 ntBASIC19.77■□□□□ 0.76
NBPF4Q96M43 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NBPF4Q96M43 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
NBPF4Q96M43 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NBPF4Q96M43 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NBPF4Q96M43 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NBPF4Q96M43 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NBPF4Q96M43 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NBPF4Q96M43 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NBPF4Q96M43 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NBPF4Q96M43 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NBPF4Q96M43 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NBPF4Q96M43 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.77■□□□□ 0.76
NBPF4Q96M43 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
NBPF4Q96M43 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NBPF4Q96M43 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NBPF4Q96M43 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.77■□□□□ 0.76
NBPF4Q96M43 RTN3P1-201ENST00000536295 711 ntBASIC19.77■□□□□ 0.76
NBPF4Q96M43 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NBPF4Q96M43 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC19.77■□□□□ 0.76
NBPF4Q96M43 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC19.77■□□□□ 0.76
NBPF4Q96M43 MIR6727-201ENST00000620702 65 ntBASIC19.77■□□□□ 0.76
NBPF4Q96M43 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
NBPF4Q96M43 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NBPF4Q96M43 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NBPF4Q96M43 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NBPF4Q96M43 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
NBPF4Q96M43 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
NBPF4Q96M43 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NBPF4Q96M43 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
NBPF4Q96M43 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NBPF4Q96M43 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC19.76■□□□□ 0.75
NBPF4Q96M43 AC006480.2-201ENST00000609770 1337 ntBASIC19.76■□□□□ 0.75
NBPF4Q96M43 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
NBPF4Q96M43 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NBPF4Q96M43 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NBPF4Q96M43 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NBPF4Q96M43 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NBPF4Q96M43 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NBPF4Q96M43 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NBPF4Q96M43 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NBPF4Q96M43 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NBPF4Q96M43 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NBPF4Q96M43 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NBPF4Q96M43 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NBPF4Q96M43 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NBPF4Q96M43 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.76■□□□□ 0.75
NBPF4Q96M43 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC19.76■□□□□ 0.75
NBPF4Q96M43 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms