Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SPCS3P61009 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.5□□□□□ -0.41
SPCS3P61009 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.5□□□□□ -0.41
SPCS3P61009 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
SPCS3P61009 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.5□□□□□ -0.41
SPCS3P61009 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.5□□□□□ -0.41
SPCS3P61009 AOC4P-203ENST00000566825 2289 ntBASIC12.5□□□□□ -0.41
SPCS3P61009 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC12.5□□□□□ -0.41
SPCS3P61009 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SPCS3P61009 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SPCS3P61009 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.49□□□□□ -0.41
SPCS3P61009 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
SPCS3P61009 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.49□□□□□ -0.41
SPCS3P61009 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.49□□□□□ -0.41
SPCS3P61009 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SPCS3P61009 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.49□□□□□ -0.41
SPCS3P61009 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.49□□□□□ -0.41
SPCS3P61009 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SPCS3P61009 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SPCS3P61009 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.49□□□□□ -0.41
SPCS3P61009 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.49□□□□□ -0.41
SPCS3P61009 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.49□□□□□ -0.41
SPCS3P61009 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.49□□□□□ -0.41
SPCS3P61009 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SPCS3P61009 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SPCS3P61009 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SPCS3P61009 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.49□□□□□ -0.41
SPCS3P61009 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SPCS3P61009 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SPCS3P61009 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.49□□□□□ -0.41
SPCS3P61009 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.49□□□□□ -0.41
SPCS3P61009 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.49□□□□□ -0.41
SPCS3P61009 TIMM8BP1-201ENST00000452384 211 ntBASIC12.49□□□□□ -0.41
SPCS3P61009 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.49□□□□□ -0.41
SPCS3P61009 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.49□□□□□ -0.41
SPCS3P61009 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.49□□□□□ -0.41
SPCS3P61009 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.49□□□□□ -0.41
SPCS3P61009 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.49□□□□□ -0.41
SPCS3P61009 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.49□□□□□ -0.41
SPCS3P61009 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.49□□□□□ -0.41
SPCS3P61009 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SPCS3P61009 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 AC006504.5-208ENST00000588784 2401 ntBASIC12.49□□□□□ -0.41
SPCS3P61009 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.49□□□□□ -0.41
SPCS3P61009 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 AC140479.7-201ENST00000636301 2332 ntBASIC12.49□□□□□ -0.41
SPCS3P61009 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.49□□□□□ -0.41
SPCS3P61009 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.49□□□□□ -0.41
SPCS3P61009 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SPCS3P61009 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.49□□□□□ -0.41
SPCS3P61009 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SPCS3P61009 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.48□□□□□ -0.41
SPCS3P61009 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms