Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 HAUS4P1-201ENST00000406739 1145 ntBASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 AC244107.1-201ENST00000442033 332 ntBASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 FAM207CP-201ENST00000443486 507 ntBASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 LINC02560-201ENST00000596379 459 ntBASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 AL035252.4-201ENST00000624174 288 ntBASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 AC008761.3-201ENST00000624803 892 ntBASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CALCOCO1Q9P1Z2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 AC092580.3-201ENST00000430932 139 ntBASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 AC012645.4-201ENST00000610691 1061 ntBASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 BNIP3P1-202ENST00000550043 1585 ntBASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 CYP4F24P-201ENST00000586049 1580 ntBASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.79■□□□□ 0.28
CALCOCO1Q9P1Z2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 MROH4P-201ENST00000431302 1578 ntBASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CALCOCO1Q9P1Z2 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms