Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN8P56748 AC009477.1-201ENST00000452936 217 ntBASIC14.51□□□□□ -0.09
CLDN8P56748 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.51□□□□□ -0.09
CLDN8P56748 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.51□□□□□ -0.09
CLDN8P56748 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CLDN8P56748 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLDN8P56748 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.51□□□□□ -0.09
CLDN8P56748 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN8P56748 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CLDN8P56748 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN8P56748 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CLDN8P56748 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.51□□□□□ -0.09
CLDN8P56748 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLDN8P56748 CLK3P2-201ENST00000427566 1453 ntBASIC14.5□□□□□ -0.09
CLDN8P56748 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
CLDN8P56748 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CLDN8P56748 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN8P56748 AC015802.1-201ENST00000588104 1449 ntBASIC14.5□□□□□ -0.09
CLDN8P56748 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN8P56748 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CLDN8P56748 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN8P56748 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN8P56748 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN8P56748 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.5□□□□□ -0.09
CLDN8P56748 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN8P56748 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN8P56748 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.5□□□□□ -0.09
CLDN8P56748 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN8P56748 AC241585.1-201ENST00000433527 519 ntBASIC14.5□□□□□ -0.09
CLDN8P56748 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.5□□□□□ -0.09
CLDN8P56748 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.5□□□□□ -0.09
CLDN8P56748 AC009407.1-201ENST00000568958 598 ntBASIC14.5□□□□□ -0.09
CLDN8P56748 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.5□□□□□ -0.09
CLDN8P56748 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.5□□□□□ -0.09
CLDN8P56748 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.5□□□□□ -0.09
CLDN8P56748 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
CLDN8P56748 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN8P56748 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CLDN8P56748 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CLDN8P56748 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CLDN8P56748 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CLDN8P56748 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN8P56748 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.5□□□□□ -0.09
CLDN8P56748 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLDN8P56748 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN8P56748 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN8P56748 DRD5P1-201ENST00000456605 1438 ntBASIC14.49□□□□□ -0.09
CLDN8P56748 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN8P56748 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CLDN8P56748 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN8P56748 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN8P56748 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN8P56748 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN8P56748 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN8P56748 AC018665.1-201ENST00000622927 1362 ntBASIC14.49□□□□□ -0.09
CLDN8P56748 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN8P56748 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.49□□□□□ -0.09
CLDN8P56748 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
CLDN8P56748 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN8P56748 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN8P56748 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN8P56748 HSPA7-201ENST00000445535 1927 ntBASIC14.49□□□□□ -0.09
CLDN8P56748 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN8P56748 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.49□□□□□ -0.09
CLDN8P56748 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CLDN8P56748 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLDN8P56748 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms