Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
APOC3P02656 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC3P02656 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
APOC3P02656 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
APOC3P02656 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
APOC3P02656 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.23□□□□□ -0.45
APOC3P02656 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
APOC3P02656 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.23□□□□□ -0.45
APOC3P02656 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
APOC3P02656 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
APOC3P02656 AC116562.2-201ENST00000507042 360 ntBASIC12.23□□□□□ -0.45
APOC3P02656 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.23□□□□□ -0.45
APOC3P02656 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.23□□□□□ -0.45
APOC3P02656 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC12.23□□□□□ -0.45
APOC3P02656 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.23□□□□□ -0.45
APOC3P02656 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
APOC3P02656 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
APOC3P02656 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.23□□□□□ -0.45
APOC3P02656 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.23□□□□□ -0.45
APOC3P02656 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.23□□□□□ -0.45
APOC3P02656 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.23□□□□□ -0.45
APOC3P02656 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.23□□□□□ -0.45
APOC3P02656 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
APOC3P02656 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
APOC3P02656 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.22□□□□□ -0.45
APOC3P02656 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
APOC3P02656 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
APOC3P02656 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.22□□□□□ -0.45
APOC3P02656 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.22□□□□□ -0.45
APOC3P02656 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.22□□□□□ -0.45
APOC3P02656 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
APOC3P02656 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
APOC3P02656 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.22□□□□□ -0.45
APOC3P02656 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.22□□□□□ -0.45
APOC3P02656 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
APOC3P02656 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.22□□□□□ -0.45
APOC3P02656 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.22□□□□□ -0.45
APOC3P02656 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
APOC3P02656 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.22□□□□□ -0.45
APOC3P02656 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
APOC3P02656 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 KRT18P5-201ENST00000436075 1291 ntBASIC12.22□□□□□ -0.45
APOC3P02656 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.22□□□□□ -0.45
APOC3P02656 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC12.22□□□□□ -0.45
APOC3P02656 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC12.22□□□□□ -0.45
APOC3P02656 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.22□□□□□ -0.45
APOC3P02656 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
APOC3P02656 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.22□□□□□ -0.45
APOC3P02656 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
APOC3P02656 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
APOC3P02656 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms