RNA–Protein interactions for RNA: ENST00000268296.8

ITGAX-201, Transcript of integrin subunit alpha X, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGAX, Length 4,703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAX-201ENST00000268296 NISCHQ9Y2I1 1504 aa22.22■■□□□ 1.15
ITGAX-201ENST00000268296 DCAF8L2P0C7V8 631 aa21.5■■□□□ 1.03
ITGAX-201ENST00000268296 SUPT5HO00267 1087 aaKnown RBP21.27■■□□□ 1
ITGAX-201ENST00000268296 SHROOM4Q9ULL8 1493 aa20.92■□□□□ 0.94
ITGAX-201ENST00000268296 PCGF6Q9BYE7 350 aa20.39■□□□□ 0.85
ITGAX-201ENST00000268296 ZEB1P37275 1124 aaPredicted RBP20.13■□□□□ 0.81
ITGAX-201ENST00000268296 EHMT2Q96KQ7 1210 aa20.09■□□□□ 0.81
ITGAX-201ENST00000268296 PELP1Q8IZL8 1130 aaKnown RBP20.08■□□□□ 0.81
ITGAX-201ENST00000268296 HRCP23327 699 aa19.93■□□□□ 0.78
ITGAX-201ENST00000268296 FAM9AQ8IZU1 332 aaPredicted RBP19.9■□□□□ 0.78
ITGAX-201ENST00000268296 CENPBP07199 599 aaPredicted RBP19.86■□□□□ 0.77
ITGAX-201ENST00000268296 APLP2Q06481 763 aa19.78■□□□□ 0.76
ITGAX-201ENST00000268296 TRIM41Q8WV44 630 aa19.77■□□□□ 0.76
ITGAX-201ENST00000268296 TRIM26Q12899 539 aaPredicted RBP19.7■□□□□ 0.74
ITGAX-201ENST00000268296 CCER1Q8TC90 406 aaPredicted RBP19.68■□□□□ 0.74
ITGAX-201ENST00000268296 MYT1Q01538 1121 aa19.64■□□□□ 0.74
ITGAX-201ENST00000268296 CHIC1Q5VXU3 224 aa19.63■□□□□ 0.73
ITGAX-201ENST00000268296 TTBK1Q5TCY1 1321 aaPredicted RBP19.53■□□□□ 0.72
ITGAX-201ENST00000268296 LOC105371045A0A1W2PR82 267 aa19.37■□□□□ 0.69
ITGAX-201ENST00000268296 PPARGC1BQ86YN6 1023 aaKnown RBP19.34■□□□□ 0.69
ITGAX-201ENST00000268296 UBTFP17480 764 aaKnown RBP19.27■□□□□ 0.68
ITGAX-201ENST00000268296 YTHDC1Q96MU7 727 aaKnown RBP19.2■□□□□ 0.66
ITGAX-201ENST00000268296 ERICH6Q7L0X2 663 aa19.11■□□□□ 0.65
ITGAX-201ENST00000268296 RANGAP1P46060 587 aaPredicted RBP19.09■□□□□ 0.65
ITGAX-201ENST00000268296 NEFLP07196 543 aa19.05■□□□□ 0.64
ITGAX-201ENST00000268296 DIEXFQ68CQ4 756 aaKnown RBP18.94■□□□□ 0.62
ITGAX-201ENST00000268296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.89■□□□□ 0.62
ITGAX-201ENST00000268296 ATP1B4Q9UN42 357 aaPredicted RBP18.78■□□□□ 0.6
ITGAX-201ENST00000268296 HNRNPUL2Q1KMD3 747 aaKnown RBP18.78■□□□□ 0.6
ITGAX-201ENST00000268296 DCAF1Q9Y4B6 1507 aa18.76■□□□□ 0.59
ITGAX-201ENST00000268296 GTF3C3Q9Y5Q9 886 aa18.71■□□□□ 0.59
ITGAX-201ENST00000268296 ACIN1Q9UKV3 1341 aaKnown RBP18.65■□□□□ 0.58
ITGAX-201ENST00000268296 ZCCHC6Q5VYS8 1495 aaKnown RBP18.57■□□□□ 0.56
ITGAX-201ENST00000268296 ZNF316A6NFI3 1004 aaPredicted RBP18.56■□□□□ 0.56
ITGAX-201ENST00000268296 ITGAEP38570 1179 aa18.56■□□□□ 0.56
ITGAX-201ENST00000268296 MYO15BQ96JP2 1530 aa18.36■□□□□ 0.53
ITGAX-201ENST00000268296 CLSPNQ9HAW4 1339 aa18.29■□□□□ 0.52
ITGAX-201ENST00000268296 SCAF1Q9H7N4 1312 aaKnown RBP18.29■□□□□ 0.52
ITGAX-201ENST00000268296 CSRNP3Q8WYN3 585 aa18.28■□□□□ 0.52
ITGAX-201ENST00000268296 NEUROD1Q13562 356 aa18.25■□□□□ 0.51
ITGAX-201ENST00000268296 DAXXQ9UER7 740 aaPredicted RBP18.2■□□□□ 0.5
ITGAX-201ENST00000268296 BCANQ96GW7 911 aa18.18■□□□□ 0.5
ITGAX-201ENST00000268296 ANP32CO43423 234 aa18.17■□□□□ 0.5
ITGAX-201ENST00000268296 FAM50AQ14320 339 aaKnown RBP18.17■□□□□ 0.5
ITGAX-201ENST00000268296 CCDC180Q9P1Z9 1646 aa18.17■□□□□ 0.5
ITGAX-201ENST00000268296 POLR3GLQ9BT43 218 aa18.15■□□□□ 0.5
ITGAX-201ENST00000268296 RTL5Q5HYW3 569 aaPredicted RBP18.14■□□□□ 0.5
ITGAX-201ENST00000268296 ABCC9O60706 1549 aa18.14■□□□□ 0.49
ITGAX-201ENST00000268296 CDK11AQ9UQ88 783 aaPredicted RBP18.1■□□□□ 0.49
ITGAX-201ENST00000268296 SCRIBQ14160 1630 aa18■□□□□ 0.47
ITGAX-201ENST00000268296 CNGB1Q14028 1251 aaPredicted RBP17.99■□□□□ 0.47
ITGAX-201ENST00000268296 PABPN1Q86U42 306 aaKnown RBP eCLIP17.97■□□□□ 0.47
ITGAX-201ENST00000268296 TRIM52Q96A61 297 aa17.95■□□□□ 0.46
ITGAX-201ENST00000268296 MIER1Q8N108 512 aa17.93■□□□□ 0.46
ITGAX-201ENST00000268296 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
ITGAX-201ENST00000268296 FKBP8Q14318 412 aa17.9■□□□□ 0.46
ITGAX-201ENST00000268296 EEA1Q15075 1411 aa17.82■□□□□ 0.44
ITGAX-201ENST00000268296 CEP162Q5TB80 1403 aa17.79■□□□□ 0.44
ITGAX-201ENST00000268296 DDX10Q13206 875 aaKnown RBP17.78■□□□□ 0.44
ITGAX-201ENST00000268296 MYT1LQ9UL68 1186 aa17.76■□□□□ 0.43
ITGAX-201ENST00000268296 CLIP1P30622 1438 aa17.75■□□□□ 0.43
ITGAX-201ENST00000268296 ANP32AP39687 249 aaKnown RBP17.75■□□□□ 0.43
ITGAX-201ENST00000268296 TONSLQ96HA7 1378 aa17.74■□□□□ 0.43
ITGAX-201ENST00000268296 TNIKQ9UKE5 1360 aa17.71■□□□□ 0.43
ITGAX-201ENST00000268296 GOLGA3Q08378 1498 aa17.7■□□□□ 0.42
ITGAX-201ENST00000268296 HNRNPUQ00839 825 aaKnown RBP eCLIP17.7■□□□□ 0.42
ITGAX-201ENST00000268296 P3H3Q8IVL6 736 aa17.67■□□□□ 0.42
ITGAX-201ENST00000268296 RB1CC1Q8TDY2 1594 aa17.66■□□□□ 0.42
ITGAX-201ENST00000268296 ZNF326Q5BKZ1 582 aaKnown RBP17.66■□□□□ 0.42
ITGAX-201ENST00000268296 ANP32EQ9BTT0 268 aa17.58■□□□□ 0.4
ITGAX-201ENST00000268296 CEP164Q9UPV0 1460 aa17.53■□□□□ 0.4
ITGAX-201ENST00000268296 FAM9BQ8IZU0 186 aa17.52■□□□□ 0.4
ITGAX-201ENST00000268296 WRNQ14191 1432 aaPredicted RBP eCLIP17.51■□□□□ 0.39
ITGAX-201ENST00000268296 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
ITGAX-201ENST00000268296 SUPT16HQ9Y5B9 1047 aaKnown RBP17.48■□□□□ 0.39
ITGAX-201ENST00000268296 NPM2Q86SE8 214 aaKnown RBP17.48■□□□□ 0.39
ITGAX-201ENST00000268296 CCDC136Q96JN2 1154 aa17.46■□□□□ 0.39
ITGAX-201ENST00000268296 ZBTB47Q9UFB7 747 aaPredicted RBP17.45■□□□□ 0.38
ITGAX-201ENST00000268296 MRS2Q9HD23 443 aa17.44■□□□□ 0.38
ITGAX-201ENST00000268296 NACADO15069 1562 aa17.43■□□□□ 0.38
ITGAX-201ENST00000268296 HIRIP3Q9BW71 556 aaPredicted RBP17.39■□□□□ 0.37
ITGAX-201ENST00000268296 CANXP27824 592 aaKnown RBP17.39■□□□□ 0.37
ITGAX-201ENST00000268296 EIF4G2P78344 907 aaKnown RBP eCLIP17.38■□□□□ 0.37
ITGAX-201ENST00000268296 BAZ1AQ9NRL2 1556 aaPredicted RBP17.38■□□□□ 0.37
ITGAX-201ENST00000268296 IRX6P78412 446 aaPredicted RBP17.37■□□□□ 0.37
ITGAX-201ENST00000268296 MTUS2Q5JR59 1369 aa17.37■□□□□ 0.37
ITGAX-201ENST00000268296 TMC1Q8TDI8 760 aa17.37■□□□□ 0.37
ITGAX-201ENST00000268296 NBR1Q14596 966 aa17.36■□□□□ 0.37
ITGAX-201ENST00000268296 CECR2Q9BXF3 1484 aa17.35■□□□□ 0.37
ITGAX-201ENST00000268296 ARID3CA6NKF2 412 aa17.34■□□□□ 0.37
ITGAX-201ENST00000268296 SOGA1O94964 1423 aa17.32■□□□□ 0.36
ITGAX-201ENST00000268296 CHIC2Q9UKJ5 165 aa17.31■□□□□ 0.36
ITGAX-201ENST00000268296 ZNF777Q9ULD5 760 aaPredicted RBP17.31■□□□□ 0.36
ITGAX-201ENST00000268296 TIMELESSQ9UNS1 1208 aa17.3■□□□□ 0.36
ITGAX-201ENST00000268296 VPS8Q8N3P4 1428 aa17.29■□□□□ 0.36
ITGAX-201ENST00000268296 CCNB3Q8WWL7 1395 aa17.27■□□□□ 0.36
ITGAX-201ENST00000268296 KIF27Q86VH2 1401 aa17.27■□□□□ 0.36
ITGAX-201ENST00000268296 CCER2I3L3R5 266 aa17.25■□□□□ 0.35
ITGAX-201ENST00000268296 PPP4R2Q9NY27 417 aa17.25■□□□□ 0.35
ITGAX-201ENST00000268296 EIF5BO60841 1220 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms