Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CUBNO60494 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC11.94□□□□□ -0.5
CUBNO60494 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CUBNO60494 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CUBNO60494 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CUBNO60494 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
CUBNO60494 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CUBNO60494 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC11.94□□□□□ -0.5
CUBNO60494 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
CUBNO60494 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC11.94□□□□□ -0.5
CUBNO60494 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 RN7SKP230-201ENST00000365642 335 ntBASIC11.93□□□□□ -0.5
CUBNO60494 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 MIR566-201ENST00000385187 94 ntBASIC11.93□□□□□ -0.5
CUBNO60494 AC026434.2-201ENST00000506094 1078 ntBASIC11.93□□□□□ -0.5
CUBNO60494 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC11.93□□□□□ -0.5
CUBNO60494 AL109837.1-201ENST00000603272 613 ntBASIC11.93□□□□□ -0.5
CUBNO60494 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.93□□□□□ -0.5
CUBNO60494 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC11.93□□□□□ -0.5
CUBNO60494 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.93□□□□□ -0.5
CUBNO60494 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC11.93□□□□□ -0.5
CUBNO60494 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.93□□□□□ -0.5
CUBNO60494 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.93□□□□□ -0.5
CUBNO60494 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC11.93□□□□□ -0.5
CUBNO60494 POU5F1P2-201ENST00000521750 823 ntBASIC11.93□□□□□ -0.5
CUBNO60494 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC11.93□□□□□ -0.5
CUBNO60494 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
CUBNO60494 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.93□□□□□ -0.5
CUBNO60494 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.93□□□□□ -0.5
CUBNO60494 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 UROS-201ENST00000368774 744 ntTSL 2 BASIC11.93□□□□□ -0.5
CUBNO60494 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC11.93□□□□□ -0.5
CUBNO60494 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
CUBNO60494 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC11.93□□□□□ -0.5
CUBNO60494 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC11.93□□□□□ -0.5
CUBNO60494 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC11.93□□□□□ -0.5
CUBNO60494 LINC00431-202ENST00000636375 159 ntBASIC11.93□□□□□ -0.5
CUBNO60494 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CUBNO60494 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CUBNO60494 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.93□□□□□ -0.5
CUBNO60494 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC11.93□□□□□ -0.5
CUBNO60494 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CUBNO60494 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.92□□□□□ -0.5
CUBNO60494 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 PSMD4P1-201ENST00000433951 1109 ntBASIC11.92□□□□□ -0.5
CUBNO60494 PUDPP3-201ENST00000445368 636 ntBASIC11.92□□□□□ -0.5
CUBNO60494 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC11.92□□□□□ -0.5
CUBNO60494 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.92□□□□□ -0.5
CUBNO60494 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 AC138466.5-201ENST00000624002 808 ntBASIC11.92□□□□□ -0.5
CUBNO60494 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
CUBNO60494 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
CUBNO60494 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.92□□□□□ -0.5
CUBNO60494 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC11.92□□□□□ -0.5
CUBNO60494 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 NCR3-202ENST00000376071 541 ntTSL 5 BASIC11.92□□□□□ -0.5
CUBNO60494 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC11.92□□□□□ -0.5
CUBNO60494 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC11.92□□□□□ -0.5
CUBNO60494 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC11.92□□□□□ -0.5
CUBNO60494 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
CUBNO60494 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC11.92□□□□□ -0.5
CUBNO60494 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 AD000864.1-201ENST00000624076 2295 ntBASIC11.92□□□□□ -0.5
CUBNO60494 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CUBNO60494 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms