Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
TSPAN4O14817 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.96□□□□□ -0.33
TSPAN4O14817 AC148477.8-201ENST00000624298 468 ntBASIC12.96□□□□□ -0.33
TSPAN4O14817 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.96□□□□□ -0.33
TSPAN4O14817 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.96□□□□□ -0.33
TSPAN4O14817 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TSPAN4O14817 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
TSPAN4O14817 FP325330.2-201ENST00000624219 5630 ntBASIC12.96□□□□□ -0.33
TSPAN4O14817 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TSPAN4O14817 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TSPAN4O14817 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.96□□□□□ -0.34
TSPAN4O14817 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TSPAN4O14817 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.96□□□□□ -0.34
TSPAN4O14817 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TSPAN4O14817 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
TSPAN4O14817 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TSPAN4O14817 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TSPAN4O14817 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TSPAN4O14817 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 BX324167.2-201ENST00000623717 3316 ntBASIC12.95□□□□□ -0.34
TSPAN4O14817 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.95□□□□□ -0.34
TSPAN4O14817 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.95□□□□□ -0.34
TSPAN4O14817 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
TSPAN4O14817 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.95□□□□□ -0.34
TSPAN4O14817 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TSPAN4O14817 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TSPAN4O14817 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TSPAN4O14817 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.95□□□□□ -0.34
TSPAN4O14817 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.95□□□□□ -0.34
TSPAN4O14817 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.95□□□□□ -0.34
TSPAN4O14817 FDX1P1-201ENST00000449115 551 ntBASIC12.95□□□□□ -0.34
TSPAN4O14817 AC136632.2-201ENST00000512891 861 ntBASIC12.95□□□□□ -0.34
TSPAN4O14817 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.95□□□□□ -0.34
TSPAN4O14817 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.95□□□□□ -0.34
TSPAN4O14817 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
TSPAN4O14817 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.95□□□□□ -0.34
TSPAN4O14817 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TSPAN4O14817 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TSPAN4O14817 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TSPAN4O14817 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TSPAN4O14817 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
TSPAN4O14817 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
TSPAN4O14817 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TSPAN4O14817 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
TSPAN4O14817 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TSPAN4O14817 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TSPAN4O14817 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 HLA-A-201ENST00000376802 1334 ntBASIC12.94□□□□□ -0.34
TSPAN4O14817 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
TSPAN4O14817 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.94□□□□□ -0.34
TSPAN4O14817 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TSPAN4O14817 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
TSPAN4O14817 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
TSPAN4O14817 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TSPAN4O14817 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.94□□□□□ -0.34
TSPAN4O14817 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.94□□□□□ -0.34
TSPAN4O14817 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.94□□□□□ -0.34
TSPAN4O14817 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.94□□□□□ -0.34
TSPAN4O14817 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.94□□□□□ -0.34
TSPAN4O14817 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.94□□□□□ -0.34
TSPAN4O14817 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.94□□□□□ -0.34
TSPAN4O14817 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.94□□□□□ -0.34
TSPAN4O14817 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.94□□□□□ -0.34
TSPAN4O14817 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.94□□□□□ -0.34
TSPAN4O14817 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.94□□□□□ -0.34
TSPAN4O14817 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.94□□□□□ -0.34
TSPAN4O14817 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.94□□□□□ -0.34
TSPAN4O14817 CSPG4P11-201ENST00000560634 4910 ntBASIC12.94□□□□□ -0.34
TSPAN4O14817 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.94□□□□□ -0.34
TSPAN4O14817 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TSPAN4O14817 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms