RNA–Protein interactions for RNA: ENST00000406316.6

NRXN1-210, Transcript of neurexin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NRXN1, Length 9,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-210ENST00000406316 PELP1Q8IZL8 1130 aaKnown RBP21.02■□□□□ 0.96
NRXN1-210ENST00000406316 MYT1Q01538 1121 aa20.52■□□□□ 0.88
NRXN1-210ENST00000406316 ERICH6Q7L0X2 663 aa19.95■□□□□ 0.78
NRXN1-210ENST00000406316 CCER1Q8TC90 406 aaPredicted RBP19.92■□□□□ 0.78
NRXN1-210ENST00000406316 YTHDC1Q96MU7 727 aaKnown RBP19.53■□□□□ 0.72
NRXN1-210ENST00000406316 TTBK1Q5TCY1 1321 aaPredicted RBP19.47■□□□□ 0.71
NRXN1-210ENST00000406316 CENPBP07199 599 aaPredicted RBP19.37■□□□□ 0.69
NRXN1-210ENST00000406316 NEFLP07196 543 aa18.98■□□□□ 0.63
NRXN1-210ENST00000406316 DCAF8L2P0C7V8 631 aa18.96■□□□□ 0.63
NRXN1-210ENST00000406316 DAXXQ9UER7 740 aaPredicted RBP18.87■□□□□ 0.61
NRXN1-210ENST00000406316 APLP2Q06481 763 aa18.73■□□□□ 0.59
NRXN1-210ENST00000406316 ZEB1P37275 1124 aaPredicted RBP18.73■□□□□ 0.59
NRXN1-210ENST00000406316 RTL5Q5HYW3 569 aaPredicted RBP18.52■□□□□ 0.56
NRXN1-210ENST00000406316 SUPT5HO00267 1087 aaKnown RBP18.44■□□□□ 0.54
NRXN1-210ENST00000406316 FAM9AQ8IZU1 332 aaPredicted RBP18.36■□□□□ 0.53
NRXN1-210ENST00000406316 PCGF6Q9BYE7 350 aa18.32■□□□□ 0.52
NRXN1-210ENST00000406316 ZNF316A6NFI3 1004 aaPredicted RBP18.32■□□□□ 0.52
NRXN1-210ENST00000406316 GLIPR1L2Q4G1C9 344 aa18.3■□□□□ 0.52
NRXN1-210ENST00000406316 EHMT2Q96KQ7 1210 aa18.2■□□□□ 0.5
NRXN1-210ENST00000406316 CLSPNQ9HAW4 1339 aa17.86■□□□□ 0.45
NRXN1-210ENST00000406316 EIF5BO60841 1220 aaKnown RBP17.85■□□□□ 0.45
NRXN1-210ENST00000406316 ANP32BQ92688 251 aaKnown RBP17.69■□□□□ 0.42
NRXN1-210ENST00000406316 MYT1LQ9UL68 1186 aa17.64■□□□□ 0.41
NRXN1-210ENST00000406316 SHROOM4Q9ULL8 1493 aa17.61■□□□□ 0.41
NRXN1-210ENST00000406316 RANGAP1P46060 587 aaPredicted RBP17.6■□□□□ 0.41
NRXN1-210ENST00000406316 CDK11AQ9UQ88 783 aaPredicted RBP17.54■□□□□ 0.4
NRXN1-210ENST00000406316 HRCP23327 699 aa17.49■□□□□ 0.39
NRXN1-210ENST00000406316 TNNT2P45379 298 aaPredicted RBP17.48■□□□□ 0.39
NRXN1-210ENST00000406316 ANP32AP39687 249 aaKnown RBP17.47■□□□□ 0.39
NRXN1-210ENST00000406316 ZBTB47Q9UFB7 747 aaPredicted RBP17.43■□□□□ 0.38
NRXN1-210ENST00000406316 ATP1B4Q9UN42 357 aaPredicted RBP17.41■□□□□ 0.38
NRXN1-210ENST00000406316 TRIM26Q12899 539 aaPredicted RBP17.36■□□□□ 0.37
NRXN1-210ENST00000406316 POLR3GLQ9BT43 218 aa17.33■□□□□ 0.36
NRXN1-210ENST00000406316 DIEXFQ68CQ4 756 aaKnown RBP17.28■□□□□ 0.36
NRXN1-210ENST00000406316 UBTFP17480 764 aaKnown RBP17.24■□□□□ 0.35
NRXN1-210ENST00000406316 CDK11BP21127 795 aaKnown RBP17.22■□□□□ 0.35
NRXN1-210ENST00000406316 GTF3C3Q9Y5Q9 886 aa17.2■□□□□ 0.34
NRXN1-210ENST00000406316 HSP90AA1P07900 732 aaKnown RBP17.18■□□□□ 0.34
NRXN1-210ENST00000406316 TRIM41Q8WV44 630 aa17.17■□□□□ 0.34
NRXN1-210ENST00000406316 TRIM44Q96DX7 344 aaPredicted RBP17.15■□□□□ 0.34
NRXN1-210ENST00000406316 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
NRXN1-210ENST00000406316 BCANQ96GW7 911 aa17.07■□□□□ 0.32
NRXN1-210ENST00000406316 NCLP19338 710 aaKnown RBP17.07■□□□□ 0.32
NRXN1-210ENST00000406316 UPF2Q9HAU5 1272 aaKnown RBP17.07■□□□□ 0.32
NRXN1-210ENST00000406316 CANXP27824 592 aaKnown RBP17.05■□□□□ 0.32
NRXN1-210ENST00000406316 CNGB1Q14028 1251 aaPredicted RBP17.02■□□□□ 0.32
NRXN1-210ENST00000406316 NEFMP07197 916 aa17■□□□□ 0.31
NRXN1-210ENST00000406316 NPM2Q86SE8 214 aaKnown RBP16.93■□□□□ 0.3
NRXN1-210ENST00000406316 ANP32CO43423 234 aa16.93■□□□□ 0.3
NRXN1-210ENST00000406316 ANP32EQ9BTT0 268 aa16.9■□□□□ 0.3
NRXN1-210ENST00000406316 NBR1Q14596 966 aa16.89■□□□□ 0.29
NRXN1-210ENST00000406316 ERICH6BQ5W0A0 696 aa16.82■□□□□ 0.28
NRXN1-210ENST00000406316 ITGAEP38570 1179 aa16.8■□□□□ 0.28
NRXN1-210ENST00000406316 ZNF326Q5BKZ1 582 aaKnown RBP16.79■□□□□ 0.28
NRXN1-210ENST00000406316 PPARGC1BQ86YN6 1023 aaKnown RBP16.79■□□□□ 0.28
NRXN1-210ENST00000406316 ACIN1Q9UKV3 1341 aaKnown RBP16.78■□□□□ 0.28
NRXN1-210ENST00000406316 BCL11AQ9H165 835 aa16.77■□□□□ 0.27
NRXN1-210ENST00000406316 ARXQ96QS3 562 aa16.77■□□□□ 0.27
NRXN1-210ENST00000406316 DNTTIP2Q5QJE6 756 aaKnown RBP16.7■□□□□ 0.26
NRXN1-210ENST00000406316 NAP1L5Q96NT1 182 aaPredicted RBP16.69■□□□□ 0.26
NRXN1-210ENST00000406316 SLC24A1O60721 1099 aa16.68■□□□□ 0.26
NRXN1-210ENST00000406316 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
NRXN1-210ENST00000406316 GOLGA6L22H0YM25 854 aa16.64■□□□□ 0.25
NRXN1-210ENST00000406316 NISCHQ9Y2I1 1504 aa16.62■□□□□ 0.25
NRXN1-210ENST00000406316 BECN1Q14457 450 aa16.62■□□□□ 0.25
NRXN1-210ENST00000406316 PTMAP06454 111 aaKnown RBP16.61■□□□□ 0.25
NRXN1-210ENST00000406316 CALRP27797 417 aaKnown RBP16.61■□□□□ 0.25
NRXN1-210ENST00000406316 DDRGK1Q96HY6 314 aa16.6■□□□□ 0.25
NRXN1-210ENST00000406316 CHAF1AQ13111 956 aaPredicted RBP16.58■□□□□ 0.25
NRXN1-210ENST00000406316 CHIC1Q5VXU3 224 aa16.58■□□□□ 0.24
NRXN1-210ENST00000406316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.57■□□□□ 0.24
NRXN1-210ENST00000406316 AMER1Q5JTC6 1135 aaPredicted RBP16.57■□□□□ 0.24
NRXN1-210ENST00000406316 ZRSR1Q15695 479 aaKnown RBP16.56■□□□□ 0.24
NRXN1-210ENST00000406316 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.53■□□□□ 0.24
NRXN1-210ENST00000406316 GOLGA6L6A8MZA4 724 aa16.53■□□□□ 0.24
NRXN1-210ENST00000406316 TNNT3P45378 269 aaPredicted RBP16.53■□□□□ 0.24
NRXN1-210ENST00000406316 FKBP8Q14318 412 aa16.52■□□□□ 0.23
NRXN1-210ENST00000406316 PTMSP20962 102 aa16.49■□□□□ 0.23
NRXN1-210ENST00000406316 NRDCO43847 1150 aa16.48■□□□□ 0.23
NRXN1-210ENST00000406316 CCDC136Q96JN2 1154 aa16.47■□□□□ 0.23
NRXN1-210ENST00000406316 L1TD1Q5T7N2 865 aaKnown RBP16.4■□□□□ 0.22
NRXN1-210ENST00000406316 NEUROD1Q13562 356 aa16.38■□□□□ 0.21
NRXN1-210ENST00000406316 MYH16Q9H6N6 1097 aa16.37■□□□□ 0.21
NRXN1-210ENST00000406316 MSNP26038 577 aaKnown RBP16.36■□□□□ 0.21
NRXN1-210ENST00000406316 PPM1GO15355 546 aaPredicted RBP16.34■□□□□ 0.21
NRXN1-210ENST00000406316 RTN4Q9NQC3 1192 aaKnown RBP16.34■□□□□ 0.21
NRXN1-210ENST00000406316 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
NRXN1-210ENST00000406316 FAM50AQ14320 339 aaKnown RBP16.32■□□□□ 0.2
NRXN1-210ENST00000406316 SETQ01105 290 aaPredicted RBP16.29■□□□□ 0.2
NRXN1-210ENST00000406316 USP35Q9P2H5 1018 aa16.26■□□□□ 0.19
NRXN1-210ENST00000406316 HNRNPUQ00839 825 aaKnown RBP eCLIP16.24■□□□□ 0.19
NRXN1-210ENST00000406316 CASC1Q6TDU7 716 aa16.24■□□□□ 0.19
NRXN1-210ENST00000406316 GOLGA6L1Q8N7Z2 621 aa16.21■□□□□ 0.19
NRXN1-210ENST00000406316 NOC3LQ8WTT2 800 aaKnown RBP16.17■□□□□ 0.18
NRXN1-210ENST00000406316 NOP58Q9Y2X3 529 aaKnown RBP16.13■□□□□ 0.17
NRXN1-210ENST00000406316 KIAA2012Q0VF49 1180 aa16.13■□□□□ 0.17
NRXN1-210ENST00000406316 PLCB2Q00722 1185 aa16.1■□□□□ 0.17
NRXN1-210ENST00000406316 PNNQ9H307 717 aaKnown RBP16.1■□□□□ 0.17
NRXN1-210ENST00000406316 A0A0U1RQG5 324 aaPredicted RBP16.09■□□□□ 0.17
NRXN1-210ENST00000406316 HSP90AA2PQ14568 343 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms