Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ENPP7P14-201ENST00000621765 1040 ntBASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-4A0A0C4DH59 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 TLE1P1-201ENST00000422965 589 ntBASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 BCRP2-202ENST00000447763 634 ntBASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 KRT17P7-201ENST00000451704 1104 ntBASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 BCRP6-201ENST00000510112 632 ntBASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 BCRP7-201ENST00000511549 544 ntBASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 AC003102.2-201ENST00000589195 1469 ntBASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 AL138725.1-201ENST00000407347 1314 ntBASIC14.92□□□□□ -0.02
TRBV5-4A0A0C4DH59 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 AC106886.1-201ENST00000568660 600 ntBASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.91□□□□□ -0.02
TRBV5-4A0A0C4DH59 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms