Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC008738.7-201ENST00000609744 511 ntBASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 AL158212.4-201ENST00000624062 1286 ntBASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.87□□□□□ -0.03
PCDHGA11Q9Y5H2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 AC092183.1-201ENST00000469884 875 ntBASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 AC004840.1-201ENST00000636359 365 ntBASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PCDHGA11Q9Y5H2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 PMS2P2-201ENST00000425039 1128 ntBASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 AC093214.1-201ENST00000511688 1107 ntBASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 RFPL4AP1-201ENST00000530883 850 ntBASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 AL390955.2-201ENST00000603032 514 ntBASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PCDHGA11Q9Y5H2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms