Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.43□□□□□ -0.42
APCP25054 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC12.43□□□□□ -0.42
APCP25054 TLE1P1-201ENST00000422965 589 ntBASIC12.43□□□□□ -0.42
APCP25054 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APCP25054 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
APCP25054 AC006529.1-201ENST00000459978 637 ntBASIC12.43□□□□□ -0.42
APCP25054 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.43□□□□□ -0.42
APCP25054 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APCP25054 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
APCP25054 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
APCP25054 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.43□□□□□ -0.42
APCP25054 BX088702.1-201ENST00000610784 235 ntBASIC12.43□□□□□ -0.42
APCP25054 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
APCP25054 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
APCP25054 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APCP25054 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APCP25054 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
APCP25054 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
APCP25054 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.43□□□□□ -0.42
APCP25054 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.43□□□□□ -0.42
APCP25054 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APCP25054 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC12.43□□□□□ -0.42
APCP25054 NME6-208ENST00000435684 599 ntTSL 2 BASIC12.43□□□□□ -0.42
APCP25054 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.43□□□□□ -0.42
APCP25054 IGHV1-12-201ENST00000518307 205 ntBASIC12.43□□□□□ -0.42
APCP25054 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APCP25054 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
APCP25054 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC12.43□□□□□ -0.42
APCP25054 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
APCP25054 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
APCP25054 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 BCRP4-201ENST00000506079 804 ntBASIC12.42□□□□□ -0.42
APCP25054 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.42□□□□□ -0.42
APCP25054 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
APCP25054 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.42□□□□□ -0.42
APCP25054 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
APCP25054 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
APCP25054 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.42□□□□□ -0.42
APCP25054 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC12.42□□□□□ -0.42
APCP25054 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC12.42□□□□□ -0.42
APCP25054 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC12.42□□□□□ -0.42
APCP25054 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC12.42□□□□□ -0.42
APCP25054 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC12.42□□□□□ -0.42
APCP25054 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
APCP25054 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.42□□□□□ -0.42
APCP25054 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
APCP25054 AL160191.2-201ENST00000603975 601 ntBASIC12.42□□□□□ -0.42
APCP25054 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.42□□□□□ -0.42
APCP25054 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
APCP25054 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.42□□□□□ -0.42
APCP25054 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.41□□□□□ -0.42
APCP25054 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.41□□□□□ -0.42
APCP25054 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.41□□□□□ -0.42
APCP25054 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 GUSBP10-201ENST00000417412 665 ntBASIC12.41□□□□□ -0.42
APCP25054 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APCP25054 RPS18P9-201ENST00000482817 460 ntBASIC12.41□□□□□ -0.42
APCP25054 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.41□□□□□ -0.42
APCP25054 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC12.41□□□□□ -0.42
APCP25054 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.41□□□□□ -0.42
APCP25054 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.41□□□□□ -0.42
APCP25054 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.41□□□□□ -0.42
APCP25054 AC020904.3-201ENST00000624199 442 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms