RNA–Protein interactions for RNA: ENST00000435684.5

NME6-208, Transcript of NME/NM23 nucleoside diphosphate kinase 6, humanhuman

TSL 2 BASIC

Gene NME6, Length 599 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME6-208ENST00000435684 NISCHQ9Y2I1 1504 aa33.21■■■□□ 2.91
NME6-208ENST00000435684 CCDC180Q9P1Z9 1646 aa29.91■■■□□ 2.38
NME6-208ENST00000435684 ABCC9O60706 1549 aa29.76■■■□□ 2.35
NME6-208ENST00000435684 RB1CC1Q8TDY2 1594 aa28.42■■■□□ 2.14
NME6-208ENST00000435684 NACADO15069 1562 aa28.24■■■□□ 2.11
NME6-208ENST00000435684 MYO15BQ96JP2 1530 aa27.92■■■□□ 2.06
NME6-208ENST00000435684 DNAJC5BQ9UF47 199 aa27.87■■■□□ 2.05
NME6-208ENST00000435684 DCAF8L2P0C7V8 631 aa27.79■■■□□ 2.04
NME6-208ENST00000435684 UNC13AQ9UPW8 1703 aa27.77■■■□□ 2.04
NME6-208ENST00000435684 PABPN1Q86U42 306 aaKnown RBP eCLIP27.61■■■□□ 2.01
NME6-208ENST00000435684 BICRAQ9NZM4 1560 aa27.58■■■□□ 2.01
NME6-208ENST00000435684 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
NME6-208ENST00000435684 DCAF1Q9Y4B6 1507 aa27.52■■■□□ 2
NME6-208ENST00000435684 SHROOM4Q9ULL8 1493 aa27.34■■□□□ 1.97
NME6-208ENST00000435684 SCRIBQ14160 1630 aa27.12■■□□□ 1.93
NME6-208ENST00000435684 CC2D2AQ9P2K1 1620 aa26.94■■□□□ 1.9
NME6-208ENST00000435684 EIF4G1Q04637 1599 aaKnown RBP26.9■■□□□ 1.9
NME6-208ENST00000435684 CECR2Q9BXF3 1484 aa26.85■■□□□ 1.89
NME6-208ENST00000435684 NCAPD3P42695 1498 aa26.04■■□□□ 1.76
NME6-208ENST00000435684 ATAD2BQ9ULI0 1458 aa25.93■■□□□ 1.74
NME6-208ENST00000435684 SMARCA4P51532 1647 aa25.92■■□□□ 1.74
NME6-208ENST00000435684 SMARCA2P51531 1590 aa25.9■■□□□ 1.74
NME6-208ENST00000435684 HMGXB3Q12766 1538 aa25.9■■□□□ 1.74
NME6-208ENST00000435684 BAZ1AQ9NRL2 1556 aaPredicted RBP25.81■■□□□ 1.72
NME6-208ENST00000435684 CUX2O14529 1486 aa25.78■■□□□ 1.72
NME6-208ENST00000435684 PEG3Q9GZU2 1588 aa25.74■■□□□ 1.71
NME6-208ENST00000435684 ERCC6Q03468 1493 aa25.72■■□□□ 1.71
NME6-208ENST00000435684 BAZ1BQ9UIG0 1483 aaKnown RBP25.68■■□□□ 1.7
NME6-208ENST00000435684 DNAJC5Q9H3Z4 198 aa25.68■■□□□ 1.7
NME6-208ENST00000435684 NESP48681 1621 aa25.55■■□□□ 1.68
NME6-208ENST00000435684 MROH2BQ7Z745 1585 aa25.55■■□□□ 1.68
NME6-208ENST00000435684 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
NME6-208ENST00000435684 THOC2Q8NI27 1593 aaKnown RBP25.42■■□□□ 1.66
NME6-208ENST00000435684 PDS5BQ9NTI5 1447 aa25.29■■□□□ 1.64
NME6-208ENST00000435684 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
NME6-208ENST00000435684 WIZO95785 1651 aa25.23■■□□□ 1.63
NME6-208ENST00000435684 CADPSQ9ULU8 1353 aa25.21■■□□□ 1.63
NME6-208ENST00000435684 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
NME6-208ENST00000435684 WDR62O43379 1518 aa25.07■■□□□ 1.6
NME6-208ENST00000435684 RSF1Q96T23 1441 aaPredicted RBP25.01■■□□□ 1.59
NME6-208ENST00000435684 TOP2AP11388 1531 aaKnown RBP24.98■■□□□ 1.59
NME6-208ENST00000435684 CEP164Q9UPV0 1460 aa24.98■■□□□ 1.59
NME6-208ENST00000435684 CFTRP13569 1480 aa24.96■■□□□ 1.59
NME6-208ENST00000435684 FANCD2Q9BXW9 1451 aa24.93■■□□□ 1.58
NME6-208ENST00000435684 PRDM2Q13029 1718 aa24.78■■□□□ 1.56
NME6-208ENST00000435684 URB2Q14146 1524 aaKnown RBP24.72■■□□□ 1.55
NME6-208ENST00000435684 CCDC88BA6NC98 1476 aa24.63■■□□□ 1.53
NME6-208ENST00000435684 IFT140Q96RY7 1462 aa24.49■■□□□ 1.51
NME6-208ENST00000435684 TOPBP1Q92547 1522 aa24.46■■□□□ 1.51
NME6-208ENST00000435684 OSCARQ8IYS5 282 aa24.46■■□□□ 1.51
NME6-208ENST00000435684 ABCC8Q09428 1581 aa24.45■■□□□ 1.5
NME6-208ENST00000435684 TRIM41Q8WV44 630 aa24.43■■□□□ 1.5
NME6-208ENST00000435684 DNMBPQ6XZF7 1577 aa24.41■■□□□ 1.5
NME6-208ENST00000435684 ZNF608Q9ULD9 1512 aaPredicted RBP24.39■■□□□ 1.49
NME6-208ENST00000435684 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.48
NME6-208ENST00000435684 TARBP1Q13395 1621 aaKnown RBP24.28■■□□□ 1.48
NME6-208ENST00000435684 RIMBP3CA6NJZ7 1639 aa24.22■■□□□ 1.47
NME6-208ENST00000435684 RIMBP3BA6NNM3 1639 aa24.22■■□□□ 1.47
NME6-208ENST00000435684 RIMBP3Q9UFD9 1639 aa24.22■■□□□ 1.47
NME6-208ENST00000435684 POLA1P09884 1462 aaPredicted RBP24.21■■□□□ 1.47
NME6-208ENST00000435684 ARHGEF11O15085 1522 aa24.15■■□□□ 1.46
NME6-208ENST00000435684 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.452e-6■■■□□ 18.3
NME6-208ENST00000435684 CHD1O14646 1710 aa24.13■■□□□ 1.45
NME6-208ENST00000435684 WDR97A6NE52 1622 aa24.13■■□□□ 1.45
NME6-208ENST00000435684 RAD54L2Q9Y4B4 1467 aa24.06■■□□□ 1.44
NME6-208ENST00000435684 SOGA1O94964 1423 aa24.05■■□□□ 1.44
NME6-208ENST00000435684 FGD5Q6ZNL6 1462 aa24.04■■□□□ 1.44
NME6-208ENST00000435684 CUX1P39880 1505 aa24.03■■□□□ 1.44
NME6-208ENST00000435684 TDRD9Q8NDG6 1382 aaKnown RBP23.97■■□□□ 1.43
NME6-208ENST00000435684 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
NME6-208ENST00000435684 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
NME6-208ENST00000435684 ARAP1Q96P48 1450 aa23.91■■□□□ 1.42
NME6-208ENST00000435684 GRIN2BQ13224 1484 aa23.9■■□□□ 1.42
NME6-208ENST00000435684 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.42
NME6-208ENST00000435684 FBLN2P98095 1184 aa23.89■■□□□ 1.41
NME6-208ENST00000435684 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
NME6-208ENST00000435684 CYB5RLQ6IPT4 315 aa23.84■■□□□ 1.41
NME6-208ENST00000435684 PBRM1Q86U86 1689 aa23.83■■□□□ 1.41
NME6-208ENST00000435684 SYNJ2O15056 1496 aa23.83■■□□□ 1.41
NME6-208ENST00000435684 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
NME6-208ENST00000435684 ABCA5Q8WWZ7 1642 aa23.8■■□□□ 1.4
NME6-208ENST00000435684 GAPVD1Q14C86 1478 aa23.79■■□□□ 1.4
NME6-208ENST00000435684 CHMP7Q8WUX9 453 aaPredicted RBP23.77■■□□□ 1.4
NME6-208ENST00000435684 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.38
NME6-208ENST00000435684 BIVM-ERCC5R4GMW8 1640 aa23.69■■□□□ 1.38
NME6-208ENST00000435684 WRNQ14191 1432 aaPredicted RBP eCLIP23.67■■□□□ 1.38
NME6-208ENST00000435684 TOP2BQ02880 1626 aa23.66■■□□□ 1.38
NME6-208ENST00000435684 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
NME6-208ENST00000435684 GRIN2AQ12879 1464 aa23.6■■□□□ 1.37
NME6-208ENST00000435684 TRHP20396 242 aaPredicted RBP23.56■■□□□ 1.36
NME6-208ENST00000435684 NUP160Q12769 1436 aa23.54■■□□□ 1.36
NME6-208ENST00000435684 ERICH3Q5RHP9 1530 aa23.53■■□□□ 1.36
NME6-208ENST00000435684 CEP170Q5SW79 1584 aa23.51■■□□□ 1.35
NME6-208ENST00000435684 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
NME6-208ENST00000435684 SHROOM2Q13796 1616 aa23.47■■□□□ 1.35
NME6-208ENST00000435684 ERCC6L2Q5T890 1561 aa23.44■■□□□ 1.34
NME6-208ENST00000435684 RUSC2Q8N2Y8 1516 aa23.28■■□□□ 1.32
NME6-208ENST00000435684 PRG4Q92954 1404 aaPredicted RBP23.24■■□□□ 1.31
NME6-208ENST00000435684 CUL7Q14999 1698 aa23.19■■□□□ 1.3
NME6-208ENST00000435684 JPH4Q96JJ6 628 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms