Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC11.01□□□□□ -0.65
PAX4O43316 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
PAX4O43316 STRCP1-201ENST00000509801 5328 ntBASIC11.01□□□□□ -0.65
PAX4O43316 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.01□□□□□ -0.65
PAX4O43316 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.01□□□□□ -0.65
PAX4O43316 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.01□□□□□ -0.65
PAX4O43316 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.01□□□□□ -0.65
PAX4O43316 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.01□□□□□ -0.65
PAX4O43316 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.01□□□□□ -0.65
PAX4O43316 FAM8A3P-201ENST00000427218 844 ntBASIC11.01□□□□□ -0.65
PAX4O43316 AC114501.2-201ENST00000439631 535 ntBASIC11.01□□□□□ -0.65
PAX4O43316 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC11.01□□□□□ -0.65
PAX4O43316 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.01□□□□□ -0.65
PAX4O43316 AC009477.1-201ENST00000452936 217 ntBASIC11.01□□□□□ -0.65
PAX4O43316 AC004890.2-204ENST00000481968 304 ntBASIC11.01□□□□□ -0.65
PAX4O43316 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.01□□□□□ -0.65
PAX4O43316 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.01□□□□□ -0.65
PAX4O43316 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC11.01□□□□□ -0.65
PAX4O43316 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
PAX4O43316 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
PAX4O43316 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.01□□□□□ -0.65
PAX4O43316 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
PAX4O43316 NAA60-208ENST00000570819 833 ntTSL 2 BASIC11.01□□□□□ -0.65
PAX4O43316 AL390955.2-201ENST00000603032 514 ntBASIC11.01□□□□□ -0.65
PAX4O43316 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.01□□□□□ -0.65
PAX4O43316 AC009452.1-201ENST00000640823 606 ntBASIC11.01□□□□□ -0.65
PAX4O43316 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.01□□□□□ -0.65
PAX4O43316 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.01□□□□□ -0.65
PAX4O43316 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.01□□□□□ -0.65
PAX4O43316 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.01□□□□□ -0.65
PAX4O43316 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.01□□□□□ -0.65
PAX4O43316 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.01□□□□□ -0.65
PAX4O43316 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
PAX4O43316 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.01□□□□□ -0.65
PAX4O43316 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC11.01□□□□□ -0.65
PAX4O43316 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.01□□□□□ -0.65
PAX4O43316 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
PAX4O43316 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PAX4O43316 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
PAX4O43316 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
PAX4O43316 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
PAX4O43316 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 AC092053.3-201ENST00000641308 4975 ntBASIC11□□□□□ -0.65
PAX4O43316 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 SSR4P1-203ENST00000599569 2260 ntBASIC11□□□□□ -0.65
PAX4O43316 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
PAX4O43316 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC11□□□□□ -0.65
PAX4O43316 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11□□□□□ -0.65
PAX4O43316 AC136621.1-201ENST00000624017 2304 ntBASIC11□□□□□ -0.65
PAX4O43316 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
PAX4O43316 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11□□□□□ -0.65
PAX4O43316 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11□□□□□ -0.65
PAX4O43316 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
PAX4O43316 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
PAX4O43316 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11□□□□□ -0.65
PAX4O43316 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms