RNA–Protein interactions for RNA: ENST00000424251.1

AC003659.1-201, humanhuman

TSL 5 BASIC

Gene AC003659.1, Length 465 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003659.1-201ENST00000424251 AEBP2Q6ZN18 517 aaPredicted RBP39.37■■■■□ 3.89
AC003659.1-201ENST00000424251 CHIC1Q5VXU3 224 aa37.86■■■■□ 3.65
AC003659.1-201ENST00000424251 SENP3Q9H4L4 574 aaPredicted RBP33.35■■■□□ 2.93
AC003659.1-201ENST00000424251 PHF23Q9BUL5 403 aaPredicted RBP33.31■■■□□ 2.92
AC003659.1-201ENST00000424251 FOXD1Q16676 465 aa31.11■■■□□ 2.57
AC003659.1-201ENST00000424251 PLPPR3Q6T4P5 718 aa30.44■■■□□ 2.46
AC003659.1-201ENST00000424251 PPP6R1Q9UPN7 881 aa29.57■■■□□ 2.32
AC003659.1-201ENST00000424251 ADRA2BP18089 450 aa29.48■■■□□ 2.31
AC003659.1-201ENST00000424251 PIAS4Q8N2W9 510 aaPredicted RBP29.15■■■□□ 2.26
AC003659.1-201ENST00000424251 MSH5O43196 834 aa28.79■■■□□ 2.2
AC003659.1-201ENST00000424251 POTEDQ86YR6 584 aa27.24■■□□□ 1.95
AC003659.1-201ENST00000424251 MAPK8IP2Q13387 824 aaPredicted RBP26.93■■□□□ 1.9
AC003659.1-201ENST00000424251 SCAF1Q9H7N4 1312 aaKnown RBP26.82■■□□□ 1.88
AC003659.1-201ENST00000424251 PPP4R3CPQ6ZMV5 832 aa26.8■■□□□ 1.88
AC003659.1-201ENST00000424251 DMRT2Q9Y5R5 561 aa26.58■■□□□ 1.85
AC003659.1-201ENST00000424251 CNKSR2Q8WXI2 1034 aa26.13■■□□□ 1.77
AC003659.1-201ENST00000424251 HOXD11P31277 338 aaPredicted RBP25.84■■□□□ 1.73
AC003659.1-201ENST00000424251 NCBP3Q53F19 620 aaKnown RBP25.84■■□□□ 1.73
AC003659.1-201ENST00000424251 RNF216Q9NWF9 866 aaPredicted RBP25.76■■□□□ 1.71
AC003659.1-201ENST00000424251 KCNA4P22459 653 aa25.63■■□□□ 1.69
AC003659.1-201ENST00000424251 NPM3O75607 178 aaKnown RBP25.59■■□□□ 1.69
AC003659.1-201ENST00000424251 DCAF8L1A6NGE4 600 aa25.4■■□□□ 1.66
AC003659.1-201ENST00000424251 DNAJC5BQ9UF47 199 aa24.9■■□□□ 1.58
AC003659.1-201ENST00000424251 RNF39Q9H2S5 420 aa24.69■■□□□ 1.54
AC003659.1-201ENST00000424251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.55■■□□□ 1.52
AC003659.1-201ENST00000424251 CACNB1Q02641 598 aaPredicted RBP24.37■■□□□ 1.49
AC003659.1-201ENST00000424251 SLC4A2P04920 1241 aa24.34■■□□□ 1.49
AC003659.1-201ENST00000424251 C1QBPQ07021 282 aaKnown RBP24.3■■□□□ 1.48
AC003659.1-201ENST00000424251 SLC4A1APQ9BWU0 796 aaKnown RBP24.24■■□□□ 1.47
AC003659.1-201ENST00000424251 U3KPZ7 1027 aaPredicted RBP24.19■■□□□ 1.46
AC003659.1-201ENST00000424251 SPINK5Q9NQ38 1064 aaPredicted RBP23.68■■□□□ 1.38
AC003659.1-201ENST00000424251 FOXD4L1Q9NU39 408 aa23.67■■□□□ 1.38
AC003659.1-201ENST00000424251 ZBTB22O15209 634 aa23.63■■□□□ 1.37
AC003659.1-201ENST00000424251 MYCNP04198 464 aaPredicted RBP23.59■■□□□ 1.37
AC003659.1-201ENST00000424251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.54■■□□□ 1.36
AC003659.1-201ENST00000424251 HNRNPUL2Q1KMD3 747 aaKnown RBP23.54■■□□□ 1.36
AC003659.1-201ENST00000424251 CAPN15O75808 1086 aa23.52■■□□□ 1.36
AC003659.1-201ENST00000424251 SAMD1Q6SPF0 538 aaPredicted RBP23.48■■□□□ 1.35
AC003659.1-201ENST00000424251 APLP2Q06481 763 aa23.38■■□□□ 1.33
AC003659.1-201ENST00000424251 DSG3P32926 999 aa23.31■■□□□ 1.32
AC003659.1-201ENST00000424251 TRHP20396 242 aaPredicted RBP23.3■■□□□ 1.32
AC003659.1-201ENST00000424251 ZNF219Q9P2Y4 722 aaPredicted RBP23.23■■□□□ 1.31
AC003659.1-201ENST00000424251 ATF5Q9Y2D1 282 aaPredicted RBP23.13■■□□□ 1.29
AC003659.1-201ENST00000424251 ABCB7O75027 752 aa23.08■■□□□ 1.29
AC003659.1-201ENST00000424251 CSRNP3Q8WYN3 585 aa23.01■■□□□ 1.27
AC003659.1-201ENST00000424251 EHMT2Q96KQ7 1210 aa22.96■■□□□ 1.27
AC003659.1-201ENST00000424251 ATXN8OSP0DMR3 200 aa22.86■■□□□ 1.25
AC003659.1-201ENST00000424251 POLA2Q14181 598 aa22.82■■□□□ 1.24
AC003659.1-201ENST00000424251 ZBTB12Q9Y330 459 aaPredicted RBP22.3■■□□□ 1.16
AC003659.1-201ENST00000424251 RBM42Q9BTD8 480 aaKnown RBP22.12■■□□□ 1.13
AC003659.1-201ENST00000424251 OSCARQ8IYS5 282 aa22.09■■□□□ 1.13
AC003659.1-201ENST00000424251 MKRN4PQ13434 485 aaPredicted RBP22.08■■□□□ 1.13
AC003659.1-201ENST00000424251 FBLN2P98095 1184 aa22.02■■□□□ 1.12
AC003659.1-201ENST00000424251 AKT1S1Q96B36 256 aa21.78■■□□□ 1.08
AC003659.1-201ENST00000424251 SPDYE2BA6NHP3 402 aa21.71■■□□□ 1.07
AC003659.1-201ENST00000424251 SPDYE6P0CI01 402 aa21.71■■□□□ 1.07
AC003659.1-201ENST00000424251 SPDYE2Q495Y8 402 aa21.71■■□□□ 1.07
AC003659.1-201ENST00000424251 REM2Q8IYK8 340 aaPredicted RBP21.62■■□□□ 1.05
AC003659.1-201ENST00000424251 ZNF692Q9BU19 519 aaPredicted RBP21.55■■□□□ 1.04
AC003659.1-201ENST00000424251 SSUH2Q9Y2M2 353 aa21.55■■□□□ 1.04
AC003659.1-201ENST00000424251 CHRDL2Q6WN34 429 aa21.49■■□□□ 1.03
AC003659.1-201ENST00000424251 POTEHQ6S545 545 aa21.42■■□□□ 1.02
AC003659.1-201ENST00000424251 PITPNM1O00562 1244 aa21.39■■□□□ 1.01
AC003659.1-201ENST00000424251 PABPN1Q86U42 306 aaKnown RBP eCLIP21.28■■□□□ 1
AC003659.1-201ENST00000424251 SPDYE4A6NLX3 237 aa21.24■□□□□ 0.99
AC003659.1-201ENST00000424251 SPDYE1Q8NFV5 336 aaPredicted RBP21.19■□□□□ 0.98
AC003659.1-201ENST00000424251 CLEC11AQ9Y240 323 aa21.14■□□□□ 0.97
AC003659.1-201ENST00000424251 PIP4P2Q8N4L2 257 aa21.13■□□□□ 0.97
AC003659.1-201ENST00000424251 FXR2P51116 673 aaKnown RBP eCLIP21.09■□□□□ 0.97
AC003659.1-201ENST00000424251 PROM2Q8N271 834 aa20.87■□□□□ 0.93
AC003659.1-201ENST00000424251 PRR29P0C7W0 189 aa20.86■□□□□ 0.93
AC003659.1-201ENST00000424251 PRKAR2AP13861 404 aaKnown RBP20.82■□□□□ 0.92
AC003659.1-201ENST00000424251 FKBP8Q14318 412 aa20.77■□□□□ 0.92
AC003659.1-201ENST00000424251 CHADLQ6NUI6 762 aa20.75■□□□□ 0.91
AC003659.1-201ENST00000424251 STAG3Q9UJ98 1225 aa20.74■□□□□ 0.91
AC003659.1-201ENST00000424251 CREBZFQ9NS37 354 aa20.56■□□□□ 0.88
AC003659.1-201ENST00000424251 HAX1O00165 279 aa20.54■□□□□ 0.88
AC003659.1-201ENST00000424251 FARP1Q9Y4F1 1045 aaPredicted RBP20.47■□□□□ 0.87
AC003659.1-201ENST00000424251 EVX2Q03828 476 aa20.46■□□□□ 0.87
AC003659.1-201ENST00000424251 C19orf67A6NJJ6 358 aa20.39■□□□□ 0.85
AC003659.1-201ENST00000424251 SP7Q8TDD2 431 aaPredicted RBP20.34■□□□□ 0.85
AC003659.1-201ENST00000424251 MNX1P50219 401 aaPredicted RBP20.31■□□□□ 0.84
AC003659.1-201ENST00000424251 CD44P16070 742 aaKnown RBP20.18■□□□□ 0.82
AC003659.1-201ENST00000424251 MIER1Q8N108 512 aa20.17■□□□□ 0.82
AC003659.1-201ENST00000424251 FBXO3Q9UK99 471 aa20.09■□□□□ 0.81
AC003659.1-201ENST00000424251 NPM1P06748 294 aaKnown RBP eCLIP20.07■□□□□ 0.8
AC003659.1-201ENST00000424251 PLCD3Q8N3E9 789 aa20.06■□□□□ 0.8
AC003659.1-201ENST00000424251 PLEKHG5O94827 1062 aa20■□□□□ 0.79
AC003659.1-201ENST00000424251 ZRANB1Q9UGI0 708 aa19.99■□□□□ 0.79
AC003659.1-201ENST00000424251 GABBR2O75899 941 aa19.95■□□□□ 0.78
AC003659.1-201ENST00000424251 VASPP50552 380 aaPredicted RBP19.92■□□□□ 0.78
AC003659.1-201ENST00000424251 ZNF579Q8NAF0 562 aaKnown RBP19.91■□□□□ 0.78
AC003659.1-201ENST00000424251 PAK3O75914 559 aaPredicted RBP19.85■□□□□ 0.77
AC003659.1-201ENST00000424251 RASEFQ8IZ41 740 aa19.83■□□□□ 0.77
AC003659.1-201ENST00000424251 ZBTB47Q9UFB7 747 aaPredicted RBP19.82■□□□□ 0.76
AC003659.1-201ENST00000424251 PHF12Q96QT6 1004 aa19.81■□□□□ 0.76
AC003659.1-201ENST00000424251 TSPYL2Q9H2G4 693 aaPredicted RBP19.81■□□□□ 0.76
AC003659.1-201ENST00000424251 NUBP1P53384 320 aa19.79■□□□□ 0.76
AC003659.1-201ENST00000424251 CCDC61Q9Y6R9 512 aa19.72■□□□□ 0.75
AC003659.1-201ENST00000424251 CLCN6P51797 869 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms