Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 AL603764.1-201ENST00000636452 321 ntBASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCSER1Q9C0I3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 LINC00552-201ENST00000625151 2579 ntBASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CCSER1Q9C0I3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 AL162726.2-201ENST00000438986 1017 ntBASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 AC022616.1-201ENST00000518688 554 ntBASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 AP001063.1-201ENST00000568332 529 ntBASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCSER1Q9C0I3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms