Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC6P09630 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.09■□□□□ 0.33
HOXC6P09630 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC6P09630 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
HOXC6P09630 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC6P09630 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC6P09630 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC6P09630 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC6P09630 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.33
HOXC6P09630 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC6P09630 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC6P09630 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC6P09630 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC6P09630 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC6P09630 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HOXC6P09630 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC6P09630 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC6P09630 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HOXC6P09630 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC6P09630 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC6P09630 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC6P09630 RN7SKP214-201ENST00000364208 315 ntBASIC17.08■□□□□ 0.32
HOXC6P09630 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC6P09630 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC6P09630 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC6P09630 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC6P09630 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC6P09630 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC6P09630 PDIA3P2-201ENST00000428073 158 ntBASIC17.08■□□□□ 0.32
HOXC6P09630 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.08■□□□□ 0.32
HOXC6P09630 RPL18P13-201ENST00000478088 569 ntBASIC17.08■□□□□ 0.32
HOXC6P09630 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC6P09630 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC6P09630 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.08■□□□□ 0.32
HOXC6P09630 AC006453.1-201ENST00000636037 1257 ntBASIC17.08■□□□□ 0.32
HOXC6P09630 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC6P09630 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC6P09630 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC6P09630 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC6P09630 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC6P09630 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC6P09630 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC6P09630 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC6P09630 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXC6P09630 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC6P09630 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HOXC6P09630 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC6P09630 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HOXC6P09630 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HOXC6P09630 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
HOXC6P09630 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
HOXC6P09630 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HOXC6P09630 AC008894.3-201ENST00000624324 3103 ntBASIC17.07■□□□□ 0.32
HOXC6P09630 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC6P09630 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC6P09630 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC6P09630 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC6P09630 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC6P09630 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXC6P09630 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC6P09630 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC6P09630 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXC6P09630 ISCA2P1-201ENST00000425548 448 ntBASIC17.07■□□□□ 0.32
HOXC6P09630 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXC6P09630 CEP164P1-201ENST00000455142 418 ntBASIC17.07■□□□□ 0.32
HOXC6P09630 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC6P09630 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXC6P09630 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
HOXC6P09630 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
HOXC6P09630 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXC6P09630 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.07■□□□□ 0.32
HOXC6P09630 AC242376.1-201ENST00000559033 726 ntBASIC17.07■□□□□ 0.32
HOXC6P09630 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXC6P09630 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC6P09630 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HOXC6P09630 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC6P09630 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC6P09630 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC6P09630 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC6P09630 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HOXC6P09630 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC6P09630 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
HOXC6P09630 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HOXC6P09630 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC6P09630 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HOXC6P09630 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXC6P09630 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HOXC6P09630 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXC6P09630 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms