Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 FAM8A3P-201ENST00000427218 844 ntBASIC15.98■□□□□ 0.15
RFX6Q8HWS3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 AC135586.1-201ENST00000539323 574 ntBASIC15.98■□□□□ 0.15
RFX6Q8HWS3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 AC092337.1-201ENST00000568699 1129 ntBASIC15.98■□□□□ 0.15
RFX6Q8HWS3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 AC000095.1-201ENST00000603208 874 ntBASIC15.98■□□□□ 0.15
RFX6Q8HWS3 AC093512.1-201ENST00000617969 520 ntBASIC15.98■□□□□ 0.15
RFX6Q8HWS3 AL158212.4-201ENST00000624062 1286 ntBASIC15.98■□□□□ 0.15
RFX6Q8HWS3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RFX6Q8HWS3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 AC055876.3-201ENST00000431496 288 ntBASIC15.97■□□□□ 0.15
RFX6Q8HWS3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 AL589987.1-201ENST00000453380 819 ntBASIC15.97■□□□□ 0.15
RFX6Q8HWS3 MEIS3P1-201ENST00000495167 958 ntBASIC15.97■□□□□ 0.15
RFX6Q8HWS3 SPDYE18-201ENST00000510091 1050 ntBASIC15.97■□□□□ 0.15
RFX6Q8HWS3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 AC138649.4-201ENST00000612222 287 ntBASIC15.97■□□□□ 0.15
RFX6Q8HWS3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 AL645728.2-202ENST00000641679 227 ntBASIC15.97■□□□□ 0.15
RFX6Q8HWS3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFX6Q8HWS3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RFX6Q8HWS3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX6Q8HWS3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.96■□□□□ 0.15
RFX6Q8HWS3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX6Q8HWS3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.96■□□□□ 0.15
RFX6Q8HWS3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX6Q8HWS3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX6Q8HWS3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFX6Q8HWS3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX6Q8HWS3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFX6Q8HWS3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RFX6Q8HWS3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms