Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ODF4Q2M2E3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
ODF4Q2M2E3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.64□□□□□ -0.23
ODF4Q2M2E3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 ELL2P1-201ENST00000413990 1906 ntBASIC13.64□□□□□ -0.23
ODF4Q2M2E3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.64□□□□□ -0.23
ODF4Q2M2E3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 MIR574-201ENST00000385209 96 ntBASIC13.64□□□□□ -0.23
ODF4Q2M2E3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 AC004832.2-201ENST00000426397 482 ntBASIC13.64□□□□□ -0.23
ODF4Q2M2E3 MKNK2P1-201ENST00000437526 628 ntBASIC13.64□□□□□ -0.23
ODF4Q2M2E3 RBPMS2P1-201ENST00000437762 623 ntBASIC13.64□□□□□ -0.23
ODF4Q2M2E3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 AC105339.1-204ENST00000636249 355 ntBASIC13.64□□□□□ -0.23
ODF4Q2M2E3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ODF4Q2M2E3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 ACE3P-201ENST00000423435 1973 ntBASIC13.63□□□□□ -0.23
ODF4Q2M2E3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 AC140479.7-201ENST00000636301 2332 ntBASIC13.63□□□□□ -0.23
ODF4Q2M2E3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ODF4Q2M2E3 AL022342.1-201ENST00000400363 863 ntBASIC13.63□□□□□ -0.23
ODF4Q2M2E3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms