Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.03□□□□□ -0.48
ZNF253O75346 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.03□□□□□ -0.48
ZNF253O75346 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.03□□□□□ -0.48
ZNF253O75346 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
ZNF253O75346 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.03□□□□□ -0.48
ZNF253O75346 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
ZNF253O75346 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.03□□□□□ -0.48
ZNF253O75346 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ZNF253O75346 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.03□□□□□ -0.48
ZNF253O75346 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ZNF253O75346 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ZNF253O75346 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ZNF253O75346 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ZNF253O75346 AC104109.2-201ENST00000602919 1418 ntBASIC12.03□□□□□ -0.48
ZNF253O75346 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.02□□□□□ -0.48
ZNF253O75346 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ZNF253O75346 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ZNF253O75346 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.02□□□□□ -0.48
ZNF253O75346 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
ZNF253O75346 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
ZNF253O75346 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.02□□□□□ -0.48
ZNF253O75346 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.02□□□□□ -0.48
ZNF253O75346 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.02□□□□□ -0.48
ZNF253O75346 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
ZNF253O75346 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.02□□□□□ -0.48
ZNF253O75346 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ZNF253O75346 CYP4F24P-201ENST00000586049 1580 ntBASIC12.02□□□□□ -0.49
ZNF253O75346 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.02□□□□□ -0.49
ZNF253O75346 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF253O75346 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.02□□□□□ -0.49
ZNF253O75346 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
ZNF253O75346 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.02□□□□□ -0.49
ZNF253O75346 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.02□□□□□ -0.49
ZNF253O75346 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF253O75346 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF253O75346 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.02□□□□□ -0.49
ZNF253O75346 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF253O75346 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF253O75346 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.02□□□□□ -0.49
ZNF253O75346 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
ZNF253O75346 AL355306.1-201ENST00000415580 579 ntBASIC12.02□□□□□ -0.49
ZNF253O75346 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.02□□□□□ -0.49
ZNF253O75346 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
ZNF253O75346 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.02□□□□□ -0.49
ZNF253O75346 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.02□□□□□ -0.49
ZNF253O75346 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.02□□□□□ -0.49
ZNF253O75346 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.02□□□□□ -0.49
ZNF253O75346 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.02□□□□□ -0.49
ZNF253O75346 AL138918.1-201ENST00000568306 659 ntBASIC12.02□□□□□ -0.49
ZNF253O75346 AC027307.2-201ENST00000591252 911 ntBASIC12.02□□□□□ -0.49
ZNF253O75346 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.02□□□□□ -0.49
ZNF253O75346 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF253O75346 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF253O75346 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.02□□□□□ -0.49
ZNF253O75346 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
ZNF253O75346 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF253O75346 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF253O75346 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF253O75346 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.02□□□□□ -0.49
ZNF253O75346 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
ZNF253O75346 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF253O75346 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF253O75346 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ZNF253O75346 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
ZNF253O75346 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
ZNF253O75346 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ZNF253O75346 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.01□□□□□ -0.49
ZNF253O75346 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
ZNF253O75346 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
ZNF253O75346 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms