RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 NISCHQ9Y2I1 1504 aa26.91■■□□□ 1.9
LINC00887-202ENST00000414120 PELP1Q8IZL8 1130 aaKnown RBP25.43■■□□□ 1.66
LINC00887-202ENST00000414120 MYT1Q01538 1121 aa25.23■■□□□ 1.63
LINC00887-202ENST00000414120 TTBK1Q5TCY1 1321 aaPredicted RBP24.4■■□□□ 1.5
LINC00887-202ENST00000414120 CCDC180Q9P1Z9 1646 aa23.54■■□□□ 1.36
LINC00887-202ENST00000414120 ABCC9O60706 1549 aa23.13■■□□□ 1.29
LINC00887-202ENST00000414120 HRCP23327 699 aa23.13■■□□□ 1.29
LINC00887-202ENST00000414120 PRKCSHP14314 528 aaPredicted RBP23.06■■□□□ 1.28
LINC00887-202ENST00000414120 ERICH6Q7L0X2 663 aa23.05■■□□□ 1.28
LINC00887-202ENST00000414120 DCAF8L2P0C7V8 631 aa22.92■■□□□ 1.26
LINC00887-202ENST00000414120 APLP2Q06481 763 aa22.91■■□□□ 1.26
LINC00887-202ENST00000414120 SLC24A1O60721 1099 aa22.76■■□□□ 1.23
LINC00887-202ENST00000414120 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
LINC00887-202ENST00000414120 BCL11AQ9H165 835 aa22.51■■□□□ 1.19
LINC00887-202ENST00000414120 ZCCHC6Q5VYS8 1495 aaKnown RBP22.46■■□□□ 1.19
LINC00887-202ENST00000414120 NACADO15069 1562 aa22.15■■□□□ 1.14
LINC00887-202ENST00000414120 RB1CC1Q8TDY2 1594 aa22.14■■□□□ 1.13
LINC00887-202ENST00000414120 FAM9AQ8IZU1 332 aaPredicted RBP22.12■■□□□ 1.13
LINC00887-202ENST00000414120 DCAF1Q9Y4B6 1507 aa22.07■■□□□ 1.12
LINC00887-202ENST00000414120 CENPBP07199 599 aaPredicted RBP22.06■■□□□ 1.12
LINC00887-202ENST00000414120 DAXXQ9UER7 740 aaPredicted RBP22.01■■□□□ 1.11
LINC00887-202ENST00000414120 SHROOM4Q9ULL8 1493 aa21.99■■□□□ 1.11
LINC00887-202ENST00000414120 MYO15BQ96JP2 1530 aa21.98■■□□□ 1.11
LINC00887-202ENST00000414120 PPARGC1BQ86YN6 1023 aaKnown RBP21.89■■□□□ 1.09
LINC00887-202ENST00000414120 SCRIBQ14160 1630 aa21.86■■□□□ 1.09
LINC00887-202ENST00000414120 PABPN1Q86U42 306 aaKnown RBP eCLIP21.83■■□□□ 1.08
LINC00887-202ENST00000414120 ACIN1Q9UKV3 1341 aaKnown RBP21.72■■□□□ 1.07
LINC00887-202ENST00000414120 UNC13AQ9UPW8 1703 aa21.57■■□□□ 1.04
LINC00887-202ENST00000414120 ZEB1P37275 1124 aaPredicted RBP21.54■■□□□ 1.04
LINC00887-202ENST00000414120 ANP32EQ9BTT0 268 aa21.53■■□□□ 1.04
LINC00887-202ENST00000414120 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
LINC00887-202ENST00000414120 EIF5BO60841 1220 aaKnown RBP21.39■■□□□ 1.02
LINC00887-202ENST00000414120 GTF3C3Q9Y5Q9 886 aa21.37■■□□□ 1.01
LINC00887-202ENST00000414120 PCGF6Q9BYE7 350 aa21.34■■□□□ 1.01
LINC00887-202ENST00000414120 NEUROD1Q13562 356 aa21.29■■□□□ 1
LINC00887-202ENST00000414120 UBE2Q2Q8WVN8 375 aa21.15■□□□□ 0.98
LINC00887-202ENST00000414120 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
LINC00887-202ENST00000414120 CSRNP3Q8WYN3 585 aa21.04■□□□□ 0.96
LINC00887-202ENST00000414120 SUPT5HO00267 1087 aaKnown RBP20.92■□□□□ 0.94
LINC00887-202ENST00000414120 DNAJC5BQ9UF47 199 aa20.91■□□□□ 0.94
LINC00887-202ENST00000414120 EIF4G1Q04637 1599 aaKnown RBP20.91■□□□□ 0.94
LINC00887-202ENST00000414120 MROH2BQ7Z745 1585 aa20.84■□□□□ 0.93
LINC00887-202ENST00000414120 BAZ1AQ9NRL2 1556 aaPredicted RBP20.82■□□□□ 0.92
LINC00887-202ENST00000414120 SMARCA4P51532 1647 aa20.78■□□□□ 0.92
LINC00887-202ENST00000414120 CLSPNQ9HAW4 1339 aa20.77■□□□□ 0.91
LINC00887-202ENST00000414120 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
LINC00887-202ENST00000414120 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
LINC00887-202ENST00000414120 TRIM26Q12899 539 aaPredicted RBP20.7■□□□□ 0.9
LINC00887-202ENST00000414120 ERICH6BQ5W0A0 696 aa20.68■□□□□ 0.9
LINC00887-202ENST00000414120 MYT1LQ9UL68 1186 aa20.68■□□□□ 0.9
LINC00887-202ENST00000414120 ANO8Q9HCE9 1232 aaPredicted RBP20.68■□□□□ 0.9
LINC00887-202ENST00000414120 ATAD2BQ9ULI0 1458 aa20.63■□□□□ 0.89
LINC00887-202ENST00000414120 WIZO95785 1651 aa20.62■□□□□ 0.89
LINC00887-202ENST00000414120 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
LINC00887-202ENST00000414120 BAZ1BQ9UIG0 1483 aaKnown RBP20.54■□□□□ 0.88
LINC00887-202ENST00000414120 PODXL2Q9NZ53 605 aa20.53■□□□□ 0.88
LINC00887-202ENST00000414120 PLEKHG5O94827 1062 aa20.52■□□□□ 0.88
LINC00887-202ENST00000414120 PKNOX2Q96KN3 472 aa20.51■□□□□ 0.87
LINC00887-202ENST00000414120 NCAPD3P42695 1498 aa20.48■□□□□ 0.87
LINC00887-202ENST00000414120 TSHZ2Q9NRE2 1034 aa20.46■□□□□ 0.87
LINC00887-202ENST00000414120 PEG3Q9GZU2 1588 aa20.42■□□□□ 0.86
LINC00887-202ENST00000414120 HMGXB3Q12766 1538 aa20.35■□□□□ 0.85
LINC00887-202ENST00000414120 TOP2AP11388 1531 aaKnown RBP20.32■□□□□ 0.84
LINC00887-202ENST00000414120 DIEXFQ68CQ4 756 aaKnown RBP20.29■□□□□ 0.84
LINC00887-202ENST00000414120 NCBP3Q53F19 620 aaKnown RBP20.25■□□□□ 0.83
LINC00887-202ENST00000414120 SALL2Q9Y467 1007 aaPredicted RBP20.24■□□□□ 0.83
LINC00887-202ENST00000414120 CCDC88BA6NC98 1476 aa20.2■□□□□ 0.82
LINC00887-202ENST00000414120 NEFLP07196 543 aa20.17■□□□□ 0.82
LINC00887-202ENST00000414120 NESP48681 1621 aa20.09■□□□□ 0.81
LINC00887-202ENST00000414120 ARXQ96QS3 562 aa20.09■□□□□ 0.81
LINC00887-202ENST00000414120 SUPT16HQ9Y5B9 1047 aaKnown RBP20.09■□□□□ 0.81
LINC00887-202ENST00000414120 RANGAP1P46060 587 aaPredicted RBP20.07■□□□□ 0.8
LINC00887-202ENST00000414120 CADPSQ9ULU8 1353 aa20.02■□□□□ 0.8
LINC00887-202ENST00000414120 DEKP35659 375 aaKnown RBP19.97■□□□□ 0.79
LINC00887-202ENST00000414120 TRIM41Q8WV44 630 aa19.96■□□□□ 0.79
LINC00887-202ENST00000414120 CCDC136Q96JN2 1154 aa19.93■□□□□ 0.78
LINC00887-202ENST00000414120 CFTRP13569 1480 aa19.91■□□□□ 0.78
LINC00887-202ENST00000414120 ERCC6Q03468 1493 aa19.9■□□□□ 0.78
LINC00887-202ENST00000414120 CHIC1Q5VXU3 224 aa19.9■□□□□ 0.78
LINC00887-202ENST00000414120 GLIPR1L2Q4G1C9 344 aa19.86■□□□□ 0.77
LINC00887-202ENST00000414120 LAMC3Q9Y6N6 1575 aa19.85■□□□□ 0.77
LINC00887-202ENST00000414120 PDS5BQ9NTI5 1447 aa19.84■□□□□ 0.77
LINC00887-202ENST00000414120 FANCIQ9NVI1 1328 aa19.84■□□□□ 0.77
LINC00887-202ENST00000414120 PDIA4P13667 645 aaKnown RBP19.83■□□□□ 0.77
LINC00887-202ENST00000414120 FANCD2Q9BXW9 1451 aa19.82■□□□□ 0.76
LINC00887-202ENST00000414120 PDE4CQ08493 712 aa19.81■□□□□ 0.76
LINC00887-202ENST00000414120 RBM19Q9Y4C8 960 aaKnown RBP19.81■□□□□ 0.76
LINC00887-202ENST00000414120 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
LINC00887-202ENST00000414120 MSH5O43196 834 aa19.71■□□□□ 0.75
LINC00887-202ENST00000414120 FGD1P98174 961 aa19.71■□□□□ 0.75
LINC00887-202ENST00000414120 KIF21AQ7Z4S6 1674 aa19.69■□□□□ 0.74
LINC00887-202ENST00000414120 ABCC8Q09428 1581 aa19.67■□□□□ 0.74
LINC00887-202ENST00000414120 YTHDC1Q96MU7 727 aaKnown RBP19.66■□□□□ 0.74
LINC00887-202ENST00000414120 KLHL34Q8N239 644 aa19.64■□□□□ 0.73
LINC00887-202ENST00000414120 ZNF316A6NFI3 1004 aaPredicted RBP19.63■□□□□ 0.73
LINC00887-202ENST00000414120 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.62■□□□□ 0.73
LINC00887-202ENST00000414120 WRNQ14191 1432 aaPredicted RBP eCLIP19.59■□□□□ 0.73
LINC00887-202ENST00000414120 MRC2Q9UBG0 1479 aa19.58■□□□□ 0.72
LINC00887-202ENST00000414120 PRDM2Q13029 1718 aa19.57■□□□□ 0.72
LINC00887-202ENST00000414120 ZMYND15Q9H091 742 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms