Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SRRM4A7MD48 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SRRM4A7MD48 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SRRM4A7MD48 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SRRM4A7MD48 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SRRM4A7MD48 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SRRM4A7MD48 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SRRM4A7MD48 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.37□□□□□ -0.43
SRRM4A7MD48 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 SNX18-202ENST00000343017 3140 ntBASIC12.36□□□□□ -0.43
SRRM4A7MD48 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 AC135586.1-201ENST00000539323 574 ntBASIC12.36□□□□□ -0.43
SRRM4A7MD48 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SRRM4A7MD48 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.36□□□□□ -0.43
SRRM4A7MD48 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 AC022144.1-201ENST00000602255 1580 ntBASIC12.35□□□□□ -0.43
SRRM4A7MD48 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 AC018529.2-202ENST00000611482 3087 ntBASIC12.35□□□□□ -0.43
SRRM4A7MD48 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 GAPDHP40-201ENST00000505218 1006 ntBASIC12.35□□□□□ -0.43
SRRM4A7MD48 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.35□□□□□ -0.43
SRRM4A7MD48 SAMD11P1-201ENST00000571429 661 ntBASIC12.35□□□□□ -0.43
SRRM4A7MD48 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SRRM4A7MD48 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms