Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM9SF2Q99805 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM9SF2Q99805 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM9SF2Q99805 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TM9SF2Q99805 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TM9SF2Q99805 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TM9SF2Q99805 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TM9SF2Q99805 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM9SF2Q99805 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TM9SF2Q99805 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.24■□□□□ 0.99
TM9SF2Q99805 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM9SF2Q99805 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM9SF2Q99805 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.24■□□□□ 0.99
TM9SF2Q99805 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.24■□□□□ 0.99
TM9SF2Q99805 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM9SF2Q99805 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TM9SF2Q99805 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TM9SF2Q99805 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.24■□□□□ 0.99
TM9SF2Q99805 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TM9SF2Q99805 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM9SF2Q99805 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TM9SF2Q99805 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM9SF2Q99805 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM9SF2Q99805 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TM9SF2Q99805 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TM9SF2Q99805 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
TM9SF2Q99805 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.23■□□□□ 0.99
TM9SF2Q99805 AC012676.1-201ENST00000574705 1949 ntBASIC21.23■□□□□ 0.99
TM9SF2Q99805 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TM9SF2Q99805 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TM9SF2Q99805 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.23■□□□□ 0.99
TM9SF2Q99805 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF2Q99805 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF2Q99805 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TM9SF2Q99805 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF2Q99805 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TM9SF2Q99805 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF2Q99805 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF2Q99805 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.22■□□□□ 0.99
TM9SF2Q99805 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF2Q99805 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF2Q99805 KRT18P24-201ENST00000344739 1156 ntBASIC21.22■□□□□ 0.99
TM9SF2Q99805 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.22■□□□□ 0.99
TM9SF2Q99805 AL592295.1-201ENST00000400984 884 ntBASIC21.22■□□□□ 0.99
TM9SF2Q99805 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.22■□□□□ 0.99
TM9SF2Q99805 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.22■□□□□ 0.99
TM9SF2Q99805 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TM9SF2Q99805 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF2Q99805 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF2Q99805 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF2Q99805 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TM9SF2Q99805 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.22■□□□□ 0.99
TM9SF2Q99805 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TM9SF2Q99805 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM9SF2Q99805 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM9SF2Q99805 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.21■□□□□ 0.99
TM9SF2Q99805 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM9SF2Q99805 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TM9SF2Q99805 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.21■□□□□ 0.99
TM9SF2Q99805 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TM9SF2Q99805 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.21■□□□□ 0.99
TM9SF2Q99805 THA1P-201ENST00000590384 1145 ntBASIC21.21■□□□□ 0.99
TM9SF2Q99805 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM9SF2Q99805 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TM9SF2Q99805 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM9SF2Q99805 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TM9SF2Q99805 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TM9SF2Q99805 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TM9SF2Q99805 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF2Q99805 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.2■□□□□ 0.98
TM9SF2Q99805 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF2Q99805 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.2■□□□□ 0.98
TM9SF2Q99805 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF2Q99805 Z92544.1-202ENST00000571933 1220 ntBASIC21.2■□□□□ 0.98
TM9SF2Q99805 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF2Q99805 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF2Q99805 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF2Q99805 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TM9SF2Q99805 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM9SF2Q99805 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM9SF2Q99805 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM9SF2Q99805 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.19■□□□□ 0.98
TM9SF2Q99805 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.19■□□□□ 0.98
TM9SF2Q99805 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TM9SF2Q99805 AC068473.5-201ENST00000616428 2072 ntBASIC21.19■□□□□ 0.98
TM9SF2Q99805 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.18■□□□□ 0.98
TM9SF2Q99805 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.18■□□□□ 0.98
TM9SF2Q99805 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF2Q99805 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF2Q99805 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.18■□□□□ 0.98
TM9SF2Q99805 AP003733.4-201ENST00000623785 1697 ntBASIC21.18■□□□□ 0.98
TM9SF2Q99805 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TM9SF2Q99805 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF2Q99805 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
TM9SF2Q99805 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF2Q99805 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
TM9SF2Q99805 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TM9SF2Q99805 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TM9SF2Q99805 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.17■□□□□ 0.98
TM9SF2Q99805 AC097639.1-201ENST00000565519 1891 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms