Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.71■■□□□ 1.07
SLC47A1Q96FL8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.71■■□□□ 1.07
SLC47A1Q96FL8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC47A1Q96FL8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.71■■□□□ 1.07
SLC47A1Q96FL8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SLC47A1Q96FL8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.71■■□□□ 1.07
SLC47A1Q96FL8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SLC47A1Q96FL8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC47A1Q96FL8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC47A1Q96FL8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
SLC47A1Q96FL8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC47A1Q96FL8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.7■■□□□ 1.06
SLC47A1Q96FL8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC47A1Q96FL8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC47A1Q96FL8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC47A1Q96FL8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC47A1Q96FL8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC47A1Q96FL8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC47A1Q96FL8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC47A1Q96FL8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC47A1Q96FL8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.69■■□□□ 1.06
SLC47A1Q96FL8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC47A1Q96FL8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC47A1Q96FL8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC47A1Q96FL8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SLC47A1Q96FL8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SLC47A1Q96FL8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC47A1Q96FL8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC47A1Q96FL8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SLC47A1Q96FL8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC47A1Q96FL8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
SLC47A1Q96FL8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
SLC47A1Q96FL8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC47A1Q96FL8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC47A1Q96FL8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC47A1Q96FL8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC47A1Q96FL8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SLC47A1Q96FL8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC47A1Q96FL8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SLC47A1Q96FL8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
SLC47A1Q96FL8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC47A1Q96FL8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC47A1Q96FL8 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.67■■□□□ 1.06
SLC47A1Q96FL8 RAP2CP1-202ENST00000605179 643 ntBASIC21.67■■□□□ 1.06
SLC47A1Q96FL8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC47A1Q96FL8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC47A1Q96FL8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC47A1Q96FL8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC47A1Q96FL8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC47A1Q96FL8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.66■■□□□ 1.06
SLC47A1Q96FL8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SLC47A1Q96FL8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC47A1Q96FL8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC47A1Q96FL8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC47A1Q96FL8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC47A1Q96FL8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC47A1Q96FL8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.65■■□□□ 1.06
SLC47A1Q96FL8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC47A1Q96FL8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.65■■□□□ 1.06
SLC47A1Q96FL8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC47A1Q96FL8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.65■■□□□ 1.06
SLC47A1Q96FL8 AC026202.3-201ENST00000600805 1127 ntBASIC21.65■■□□□ 1.06
SLC47A1Q96FL8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC47A1Q96FL8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC47A1Q96FL8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.64■■□□□ 1.06
SLC47A1Q96FL8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SLC47A1Q96FL8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.64■■□□□ 1.06
SLC47A1Q96FL8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
SLC47A1Q96FL8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
SLC47A1Q96FL8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.06
SLC47A1Q96FL8 RNF126P1-201ENST00000567452 1320 ntBASIC21.64■■□□□ 1.05
SLC47A1Q96FL8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC47A1Q96FL8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SLC47A1Q96FL8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC47A1Q96FL8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
SLC47A1Q96FL8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC47A1Q96FL8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC47A1Q96FL8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC47A1Q96FL8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC47A1Q96FL8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC47A1Q96FL8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC47A1Q96FL8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC47A1Q96FL8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC47A1Q96FL8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
SLC47A1Q96FL8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC47A1Q96FL8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
SLC47A1Q96FL8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC47A1Q96FL8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC47A1Q96FL8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SLC47A1Q96FL8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC47A1Q96FL8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC47A1Q96FL8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC47A1Q96FL8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC47A1Q96FL8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC47A1Q96FL8 KRT18P10-201ENST00000388836 1287 ntBASIC21.62■■□□□ 1.05
SLC47A1Q96FL8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC47A1Q96FL8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC47A1Q96FL8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC47A1Q96FL8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC47A1Q96FL8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms