Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HPS1Q92902 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HPS1Q92902 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HPS1Q92902 AC096887.2-201ENST00000623443 1957 ntBASIC20.81■□□□□ 0.92
HPS1Q92902 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HPS1Q92902 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
HPS1Q92902 ATP5G2P3-201ENST00000429083 425 ntBASIC20.8■□□□□ 0.92
HPS1Q92902 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.8■□□□□ 0.92
HPS1Q92902 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HPS1Q92902 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPS1Q92902 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HPS1Q92902 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPS1Q92902 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
HPS1Q92902 AC004987.1-201ENST00000428627 508 ntBASIC20.79■□□□□ 0.92
HPS1Q92902 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
HPS1Q92902 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.79■□□□□ 0.92
HPS1Q92902 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HPS1Q92902 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HPS1Q92902 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HPS1Q92902 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.79■□□□□ 0.92
HPS1Q92902 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HPS1Q92902 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS1Q92902 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.78■□□□□ 0.92
HPS1Q92902 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS1Q92902 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPS1Q92902 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPS1Q92902 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS1Q92902 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.78■□□□□ 0.92
HPS1Q92902 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPS1Q92902 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.78■□□□□ 0.92
HPS1Q92902 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPS1Q92902 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
HPS1Q92902 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
HPS1Q92902 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPS1Q92902 SMPD5-203ENST00000639008 1464 ntBASIC20.77■□□□□ 0.92
HPS1Q92902 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
HPS1Q92902 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPS1Q92902 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPS1Q92902 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.77■□□□□ 0.92
HPS1Q92902 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HPS1Q92902 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.77■□□□□ 0.92
HPS1Q92902 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HPS1Q92902 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HPS1Q92902 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS1Q92902 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.76■□□□□ 0.91
HPS1Q92902 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.76■□□□□ 0.91
HPS1Q92902 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.76■□□□□ 0.91
HPS1Q92902 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS1Q92902 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HPS1Q92902 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HPS1Q92902 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HPS1Q92902 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HPS1Q92902 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HPS1Q92902 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
HPS1Q92902 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HPS1Q92902 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS1Q92902 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HPS1Q92902 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS1Q92902 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HPS1Q92902 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS1Q92902 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS1Q92902 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HPS1Q92902 AC010501.1-201ENST00000606270 1962 ntBASIC20.75■□□□□ 0.91
HPS1Q92902 AL121603.2-201ENST00000557373 2117 ntBASIC20.75■□□□□ 0.91
HPS1Q92902 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HPS1Q92902 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HPS1Q92902 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HPS1Q92902 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPS1Q92902 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.74■□□□□ 0.91
HPS1Q92902 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPS1Q92902 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPS1Q92902 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HPS1Q92902 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HPS1Q92902 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HPS1Q92902 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HPS1Q92902 ABCB10P4-201ENST00000566803 2184 ntBASIC20.74■□□□□ 0.91
HPS1Q92902 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPS1Q92902 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPS1Q92902 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HPS1Q92902 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HPS1Q92902 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.73■□□□□ 0.91
HPS1Q92902 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPS1Q92902 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.73■□□□□ 0.91
HPS1Q92902 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPS1Q92902 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.73■□□□□ 0.91
HPS1Q92902 AC133552.2-201ENST00000619106 1032 ntBASIC20.73■□□□□ 0.91
HPS1Q92902 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.73■□□□□ 0.91
HPS1Q92902 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HPS1Q92902 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.73■□□□□ 0.91
HPS1Q92902 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HPS1Q92902 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HPS1Q92902 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.73■□□□□ 0.91
HPS1Q92902 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.72■□□□□ 0.91
HPS1Q92902 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.72■□□□□ 0.91
HPS1Q92902 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HPS1Q92902 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.72■□□□□ 0.91
HPS1Q92902 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HPS1Q92902 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.72■□□□□ 0.91
HPS1Q92902 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HPS1Q92902 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms