Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC107Q8WV48 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC107Q8WV48 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC107Q8WV48 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC107Q8WV48 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC107Q8WV48 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC107Q8WV48 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC107Q8WV48 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC107Q8WV48 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC107Q8WV48 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC107Q8WV48 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC107Q8WV48 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC107Q8WV48 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC107Q8WV48 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC107Q8WV48 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
CCDC107Q8WV48 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC107Q8WV48 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC107Q8WV48 AL117328.2-201ENST00000624617 1940 ntBASIC19.83■□□□□ 0.77
CCDC107Q8WV48 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC107Q8WV48 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC107Q8WV48 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
CCDC107Q8WV48 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC107Q8WV48 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC107Q8WV48 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC107Q8WV48 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC107Q8WV48 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC107Q8WV48 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC107Q8WV48 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC107Q8WV48 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC107Q8WV48 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC107Q8WV48 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC107Q8WV48 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC107Q8WV48 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC107Q8WV48 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC107Q8WV48 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC107Q8WV48 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CCDC107Q8WV48 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC107Q8WV48 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC107Q8WV48 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC107Q8WV48 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC107Q8WV48 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC107Q8WV48 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC107Q8WV48 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC107Q8WV48 AC007029.1-201ENST00000604183 313 ntBASIC19.81■□□□□ 0.76
CCDC107Q8WV48 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC107Q8WV48 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC107Q8WV48 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.81■□□□□ 0.76
CCDC107Q8WV48 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC107Q8WV48 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC107Q8WV48 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC107Q8WV48 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC107Q8WV48 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC107Q8WV48 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC107Q8WV48 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC107Q8WV48 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC107Q8WV48 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC107Q8WV48 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC107Q8WV48 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC107Q8WV48 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC107Q8WV48 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC107Q8WV48 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC107Q8WV48 AC004812.2-201ENST00000611079 2094 ntBASIC19.8■□□□□ 0.76
CCDC107Q8WV48 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC107Q8WV48 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC107Q8WV48 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC107Q8WV48 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC107Q8WV48 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC107Q8WV48 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC107Q8WV48 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.79■□□□□ 0.76
CCDC107Q8WV48 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC107Q8WV48 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.79■□□□□ 0.76
CCDC107Q8WV48 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC107Q8WV48 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.78■□□□□ 0.76
CCDC107Q8WV48 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC107Q8WV48 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC107Q8WV48 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC107Q8WV48 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC107Q8WV48 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CCDC107Q8WV48 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC107Q8WV48 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CCDC107Q8WV48 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.78■□□□□ 0.76
CCDC107Q8WV48 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC107Q8WV48 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC107Q8WV48 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC107Q8WV48 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC107Q8WV48 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC107Q8WV48 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.77■□□□□ 0.76
CCDC107Q8WV48 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC107Q8WV48 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC107Q8WV48 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC107Q8WV48 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC107Q8WV48 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC107Q8WV48 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC107Q8WV48 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
CCDC107Q8WV48 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC107Q8WV48 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC107Q8WV48 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC107Q8WV48 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC107Q8WV48 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CCDC107Q8WV48 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms