Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP1BQ7LBR1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CHMP1BQ7LBR1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.1■□□□□ 0.97
CHMP1BQ7LBR1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHMP1BQ7LBR1 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP1BQ7LBR1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHMP1BQ7LBR1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.09■□□□□ 0.97
CHMP1BQ7LBR1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP1BQ7LBR1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP1BQ7LBR1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CHMP1BQ7LBR1 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.09■□□□□ 0.97
CHMP1BQ7LBR1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP1BQ7LBR1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.09■□□□□ 0.97
CHMP1BQ7LBR1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP1BQ7LBR1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHMP1BQ7LBR1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHMP1BQ7LBR1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP1BQ7LBR1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.08■□□□□ 0.97
CHMP1BQ7LBR1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP1BQ7LBR1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP1BQ7LBR1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP1BQ7LBR1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP1BQ7LBR1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
CHMP1BQ7LBR1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP1BQ7LBR1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHMP1BQ7LBR1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHMP1BQ7LBR1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CHMP1BQ7LBR1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CHMP1BQ7LBR1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP1BQ7LBR1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP1BQ7LBR1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.07■□□□□ 0.96
CHMP1BQ7LBR1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP1BQ7LBR1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
CHMP1BQ7LBR1 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.07■□□□□ 0.96
CHMP1BQ7LBR1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.07■□□□□ 0.96
CHMP1BQ7LBR1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP1BQ7LBR1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP1BQ7LBR1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.07■□□□□ 0.96
CHMP1BQ7LBR1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CHMP1BQ7LBR1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.07■□□□□ 0.96
CHMP1BQ7LBR1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP1BQ7LBR1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CHMP1BQ7LBR1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP1BQ7LBR1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP1BQ7LBR1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CHMP1BQ7LBR1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP1BQ7LBR1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.06■□□□□ 0.96
CHMP1BQ7LBR1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP1BQ7LBR1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP1BQ7LBR1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.06■□□□□ 0.96
CHMP1BQ7LBR1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.06■□□□□ 0.96
CHMP1BQ7LBR1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CHMP1BQ7LBR1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP1BQ7LBR1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CHMP1BQ7LBR1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.06■□□□□ 0.96
CHMP1BQ7LBR1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP1BQ7LBR1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP1BQ7LBR1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.05■□□□□ 0.96
CHMP1BQ7LBR1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.05■□□□□ 0.96
CHMP1BQ7LBR1 MIR4281-201ENST00000580852 62 ntBASIC21.05■□□□□ 0.96
CHMP1BQ7LBR1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP1BQ7LBR1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CHMP1BQ7LBR1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 AC137630.3-201ENST00000607245 391 ntBASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 MIR4787-201ENST00000607364 84 ntBASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHMP1BQ7LBR1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP1BQ7LBR1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP1BQ7LBR1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.03■□□□□ 0.96
CHMP1BQ7LBR1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CHMP1BQ7LBR1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP1BQ7LBR1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.03■□□□□ 0.96
CHMP1BQ7LBR1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.03■□□□□ 0.96
CHMP1BQ7LBR1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHMP1BQ7LBR1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CHMP1BQ7LBR1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CHMP1BQ7LBR1 GUSBP5-201ENST00000418136 578 ntBASIC21.02■□□□□ 0.96
CHMP1BQ7LBR1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.02■□□□□ 0.96
CHMP1BQ7LBR1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CHMP1BQ7LBR1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.02■□□□□ 0.96
CHMP1BQ7LBR1 AC090877.2-201ENST00000558441 1738 ntBASIC21.01■□□□□ 0.95
CHMP1BQ7LBR1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMP1BQ7LBR1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CHMP1BQ7LBR1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms