Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD53P19397 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD53P19397 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CD53P19397 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD53P19397 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
CD53P19397 AC019171.1-201ENST00000601251 1056 ntBASIC20.9■□□□□ 0.94
CD53P19397 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD53P19397 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.9■□□□□ 0.94
CD53P19397 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.9■□□□□ 0.94
CD53P19397 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CD53P19397 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CD53P19397 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CD53P19397 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CD53P19397 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CD53P19397 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.89■□□□□ 0.94
CD53P19397 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.89■□□□□ 0.93
CD53P19397 AC079834.2-201ENST00000609776 1949 ntBASIC20.89■□□□□ 0.93
CD53P19397 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.89■□□□□ 0.93
CD53P19397 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.89■□□□□ 0.93
CD53P19397 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CD53P19397 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.89■□□□□ 0.93
CD53P19397 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD53P19397 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.89■□□□□ 0.93
CD53P19397 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CD53P19397 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD53P19397 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.88■□□□□ 0.93
CD53P19397 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.88■□□□□ 0.93
CD53P19397 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD53P19397 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CD53P19397 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.88■□□□□ 0.93
CD53P19397 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.88■□□□□ 0.93
CD53P19397 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CD53P19397 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CD53P19397 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD53P19397 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD53P19397 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.87■□□□□ 0.93
CD53P19397 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CD53P19397 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.87■□□□□ 0.93
CD53P19397 AC239859.2-201ENST00000444165 318 ntBASIC20.87■□□□□ 0.93
CD53P19397 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD53P19397 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.87■□□□□ 0.93
CD53P19397 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CD53P19397 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CD53P19397 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD53P19397 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CD53P19397 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.86■□□□□ 0.93
CD53P19397 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD53P19397 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.86■□□□□ 0.93
CD53P19397 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CD53P19397 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CD53P19397 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD53P19397 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD53P19397 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD53P19397 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD53P19397 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD53P19397 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.85■□□□□ 0.93
CD53P19397 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.85■□□□□ 0.93
CD53P19397 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.85■□□□□ 0.93
CD53P19397 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.85■□□□□ 0.93
CD53P19397 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD53P19397 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD53P19397 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.84■□□□□ 0.93
CD53P19397 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD53P19397 AC087393.1-201ENST00000582896 145 ntBASIC20.84■□□□□ 0.93
CD53P19397 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CD53P19397 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.83■□□□□ 0.93
CD53P19397 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.83■□□□□ 0.93
CD53P19397 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD53P19397 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CD53P19397 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CD53P19397 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.83■□□□□ 0.93
CD53P19397 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.83■□□□□ 0.93
CD53P19397 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD53P19397 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD53P19397 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD53P19397 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.82■□□□□ 0.92
CD53P19397 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CD53P19397 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CD53P19397 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD53P19397 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CD53P19397 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.82■□□□□ 0.92
CD53P19397 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD53P19397 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.82■□□□□ 0.92
CD53P19397 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CD53P19397 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.82■□□□□ 0.92
CD53P19397 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD53P19397 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD53P19397 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD53P19397 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD53P19397 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.81■□□□□ 0.92
CD53P19397 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD53P19397 Z92544.1-202ENST00000571933 1220 ntBASIC20.81■□□□□ 0.92
CD53P19397 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.81■□□□□ 0.92
CD53P19397 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.81■□□□□ 0.92
CD53P19397 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD53P19397 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.81■□□□□ 0.92
CD53P19397 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD53P19397 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD53P19397 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD53P19397 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms