Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 KRT8P23-201ENST00000560090 1207 ntBASIC18.89■□□□□ 0.61
UPF2Q9HAU5 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 SPDYE9P-201ENST00000570642 692 ntBASIC18.89■□□□□ 0.61
UPF2Q9HAU5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 SPDYE10P-202ENST00000612005 668 ntBASIC18.89■□□□□ 0.61
UPF2Q9HAU5 SPDYE8P-202ENST00000612377 668 ntBASIC18.89■□□□□ 0.61
UPF2Q9HAU5 AC091812.2-201ENST00000619081 385 ntBASIC18.89■□□□□ 0.61
UPF2Q9HAU5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 AC018529.2-202ENST00000611482 3087 ntBASIC18.89■□□□□ 0.61
UPF2Q9HAU5 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPF2Q9HAU5 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 AC041040.2-201ENST00000622926 2899 ntBASIC18.88■□□□□ 0.61
UPF2Q9HAU5 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 TET3-201ENST00000305799 5174 ntTSL 5 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 AC012508.2-201ENST00000567613 1472 ntBASIC18.88■□□□□ 0.61
UPF2Q9HAU5 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC18.88■□□□□ 0.61
UPF2Q9HAU5 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 TKT-201ENST00000296289 1931 ntTSL 5 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 RNA5SP416-201ENST00000516838 111 ntBASIC18.87■□□□□ 0.61
UPF2Q9HAU5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPF2Q9HAU5 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms