Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 AL589987.1-201ENST00000453380 819 ntBASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 AC092183.1-201ENST00000469884 875 ntBASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 GAPDHP40-201ENST00000505218 1006 ntBASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 SPDYE18-201ENST00000510091 1050 ntBASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 RFPL4AP1-201ENST00000530883 850 ntBASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 AC135586.1-201ENST00000539323 574 ntBASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 AC012508.2-201ENST00000567613 1472 ntBASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H3AQ71DI3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HIST2H3AQ71DI3 LINC00528-201ENST00000600723 2160 ntBASIC13.52□□□□□ -0.24
HIST2H3AQ71DI3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST2H3AQ71DI3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST2H3AQ71DI3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
HIST2H3AQ71DI3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
HIST2H3AQ71DI3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST2H3AQ71DI3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST2H3AQ71DI3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.52□□□□□ -0.24
HIST2H3AQ71DI3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
HIST2H3AQ71DI3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST2H3AQ71DI3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST2H3AQ71DI3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST2H3AQ71DI3 SNX18-202ENST00000343017 3140 ntBASIC13.52□□□□□ -0.24
HIST2H3AQ71DI3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST2H3AQ71DI3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 AP000845.1-201ENST00000581677 2131 ntBASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H3AQ71DI3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST2H3AQ71DI3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST2H3AQ71DI3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST2H3AQ71DI3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms