Protein–RNA interactions for Protein: P47895

ALDH1A3, Aldehyde dehydrogenase family 1 member A3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3P47895 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ALDH1A3P47895 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.22■□□□□ 0.19
ALDH1A3P47895 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
ALDH1A3P47895 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.22■□□□□ 0.19
ALDH1A3P47895 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.22■□□□□ 0.19
ALDH1A3P47895 KLF2P2-201ENST00000416807 1039 ntBASIC16.22■□□□□ 0.19
ALDH1A3P47895 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.22■□□□□ 0.19
ALDH1A3P47895 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.22■□□□□ 0.19
ALDH1A3P47895 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.22■□□□□ 0.19
ALDH1A3P47895 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.22■□□□□ 0.19
ALDH1A3P47895 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.22■□□□□ 0.19
ALDH1A3P47895 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.22■□□□□ 0.19
ALDH1A3P47895 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.22■□□□□ 0.19
ALDH1A3P47895 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ALDH1A3P47895 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ALDH1A3P47895 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ALDH1A3P47895 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 ACTBP8-201ENST00000403258 1108 ntBASIC16.21■□□□□ 0.19
ALDH1A3P47895 MIR1908-201ENST00000410394 80 ntBASIC16.21■□□□□ 0.19
ALDH1A3P47895 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 FAM197Y7-201ENST00000432892 766 ntBASIC16.21■□□□□ 0.19
ALDH1A3P47895 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 AC022494.1-201ENST00000466044 728 ntBASIC16.21■□□□□ 0.19
ALDH1A3P47895 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 MIR4538-201ENST00000581377 78 ntBASIC16.21■□□□□ 0.19
ALDH1A3P47895 AC138951.2-201ENST00000623455 1161 ntBASIC16.21■□□□□ 0.19
ALDH1A3P47895 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ALDH1A3P47895 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.21■□□□□ 0.19
ALDH1A3P47895 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.21■□□□□ 0.18
ALDH1A3P47895 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
ALDH1A3P47895 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
ALDH1A3P47895 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ALDH1A3P47895 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
ALDH1A3P47895 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ALDH1A3P47895 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.21■□□□□ 0.18
ALDH1A3P47895 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALDH1A3P47895 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ALDH1A3P47895 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.2■□□□□ 0.18
ALDH1A3P47895 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.2■□□□□ 0.18
ALDH1A3P47895 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALDH1A3P47895 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.2■□□□□ 0.18
ALDH1A3P47895 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.2■□□□□ 0.18
ALDH1A3P47895 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALDH1A3P47895 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALDH1A3P47895 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.2■□□□□ 0.18
ALDH1A3P47895 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.2■□□□□ 0.18
ALDH1A3P47895 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALDH1A3P47895 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.2■□□□□ 0.18
ALDH1A3P47895 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ALDH1A3P47895 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ALDH1A3P47895 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ALDH1A3P47895 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ALDH1A3P47895 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms