Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.51□□□□□ -0.25
RAB3BP20337 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.51□□□□□ -0.25
RAB3BP20337 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RAB3BP20337 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.51□□□□□ -0.25
RAB3BP20337 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB3BP20337 AC004877.2-201ENST00000623941 599 ntBASIC13.51□□□□□ -0.25
RAB3BP20337 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB3BP20337 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RAB3BP20337 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RAB3BP20337 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB3BP20337 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB3BP20337 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB3BP20337 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RAB3BP20337 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.5□□□□□ -0.25
RAB3BP20337 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB3BP20337 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RAB3BP20337 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB3BP20337 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RAB3BP20337 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB3BP20337 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
RAB3BP20337 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB3BP20337 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.5□□□□□ -0.25
RAB3BP20337 UPK3BP1-201ENST00000428678 509 ntBASIC13.5□□□□□ -0.25
RAB3BP20337 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.5□□□□□ -0.25
RAB3BP20337 FAM210CP-201ENST00000445714 574 ntBASIC13.5□□□□□ -0.25
RAB3BP20337 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB3BP20337 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.5□□□□□ -0.25
RAB3BP20337 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.5□□□□□ -0.25
RAB3BP20337 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.5□□□□□ -0.25
RAB3BP20337 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.5□□□□□ -0.25
RAB3BP20337 AC148477.8-201ENST00000624298 468 ntBASIC13.5□□□□□ -0.25
RAB3BP20337 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.5□□□□□ -0.25
RAB3BP20337 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.5□□□□□ -0.25
RAB3BP20337 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RAB3BP20337 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RAB3BP20337 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RAB3BP20337 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RAB3BP20337 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RAB3BP20337 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RAB3BP20337 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB3BP20337 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB3BP20337 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB3BP20337 AC138969.3-201ENST00000546612 1459 ntBASIC13.49□□□□□ -0.25
RAB3BP20337 AC138932.2-201ENST00000548268 1459 ntBASIC13.49□□□□□ -0.25
RAB3BP20337 AC126755.4-201ENST00000549796 1459 ntBASIC13.49□□□□□ -0.25
RAB3BP20337 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB3BP20337 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.49□□□□□ -0.25
RAB3BP20337 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB3BP20337 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB3BP20337 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RAB3BP20337 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RAB3BP20337 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.49□□□□□ -0.25
RAB3BP20337 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
RAB3BP20337 AZGP1P1-201ENST00000411909 902 ntBASIC13.49□□□□□ -0.25
RAB3BP20337 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB3BP20337 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.49□□□□□ -0.25
RAB3BP20337 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.49□□□□□ -0.25
RAB3BP20337 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms