Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
BBS4Q96RK4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BBS4Q96RK4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 AC023824.1-201ENST00000562945 2975 ntBASIC14.61□□□□□ -0.07
BBS4Q96RK4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 AC092337.1-201ENST00000568699 1129 ntBASIC14.61□□□□□ -0.07
BBS4Q96RK4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
BBS4Q96RK4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BBS4Q96RK4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 PMS2P2-201ENST00000425039 1128 ntBASIC14.6□□□□□ -0.07
BBS4Q96RK4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 AC004890.2-204ENST00000481968 304 ntBASIC14.6□□□□□ -0.07
BBS4Q96RK4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.6□□□□□ -0.07
BBS4Q96RK4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
BBS4Q96RK4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms