Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM4Q8WVI0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 KRT8P22-201ENST00000562317 1415 ntBASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 KRT8P24-201ENST00000560290 1559 ntBASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.15□□□□□ -0.3
SMIM4Q8WVI0 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SMIM4Q8WVI0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SMIM4Q8WVI0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.15□□□□□ -0.31
SMIM4Q8WVI0 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SMIM4Q8WVI0 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SMIM4Q8WVI0 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.14□□□□□ -0.31
SMIM4Q8WVI0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms