Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDKAL1Q5VV42 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.76■□□□□ 0.27
CDKAL1Q5VV42 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
CDKAL1Q5VV42 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKAL1Q5VV42 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKAL1Q5VV42 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKAL1Q5VV42 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDKAL1Q5VV42 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKAL1Q5VV42 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.76■□□□□ 0.27
CDKAL1Q5VV42 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDKAL1Q5VV42 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKAL1Q5VV42 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 AC152010.1-201ENST00000415779 2006 ntBASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 AC004967.1-201ENST00000453589 447 ntBASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 AC140878.1-201ENST00000565277 250 ntBASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 AC023090.2-201ENST00000625182 2110 ntBASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CDKAL1Q5VV42 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 AC005840.4-201ENST00000541242 2494 ntBASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 SNHG9-202ENST00000564014 471 ntBASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 AL596442.2-201ENST00000610240 980 ntBASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 AL354702.1-201ENST00000442006 1960 ntBASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDKAL1Q5VV42 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms