Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PDGFAP04085 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFAP04085 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PDGFAP04085 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFAP04085 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.45□□□□□ -0.1
PDGFAP04085 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFAP04085 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFAP04085 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFAP04085 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
PDGFAP04085 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.45□□□□□ -0.1
PDGFAP04085 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 GRK6P1-201ENST00000400595 1711 ntBASIC14.45□□□□□ -0.1
PDGFAP04085 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFAP04085 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.45□□□□□ -0.1
PDGFAP04085 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.45□□□□□ -0.1
PDGFAP04085 POU5F1P6-201ENST00000466990 990 ntBASIC14.45□□□□□ -0.1
PDGFAP04085 RPL13AP25-201ENST00000484130 612 ntBASIC14.45□□□□□ -0.1
PDGFAP04085 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFAP04085 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.45□□□□□ -0.1
PDGFAP04085 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.45□□□□□ -0.1
PDGFAP04085 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.45□□□□□ -0.1
PDGFAP04085 RN7SL560P-201ENST00000577943 264 ntBASIC14.45□□□□□ -0.1
PDGFAP04085 GNRHR2-203ENST00000581100 1187 ntBASIC14.45□□□□□ -0.1
PDGFAP04085 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.45□□□□□ -0.1
PDGFAP04085 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.45□□□□□ -0.1
PDGFAP04085 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PDGFAP04085 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PDGFAP04085 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.45□□□□□ -0.1
PDGFAP04085 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PDGFAP04085 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PDGFAP04085 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PDGFAP04085 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PDGFAP04085 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDGFAP04085 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFAP04085 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
PDGFAP04085 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFAP04085 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PDGFAP04085 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PDGFAP04085 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFAP04085 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PDGFAP04085 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.44□□□□□ -0.1
PDGFAP04085 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFAP04085 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.44□□□□□ -0.1
PDGFAP04085 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.44□□□□□ -0.1
PDGFAP04085 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PDGFAP04085 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFAP04085 AP001063.1-201ENST00000568332 529 ntBASIC14.44□□□□□ -0.1
PDGFAP04085 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.44□□□□□ -0.1
PDGFAP04085 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PDGFAP04085 AC091271.1-201ENST00000611877 1162 ntBASIC14.44□□□□□ -0.1
PDGFAP04085 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.44□□□□□ -0.1
PDGFAP04085 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC14.44□□□□□ -0.1
PDGFAP04085 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PDGFAP04085 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
PDGFAP04085 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFAP04085 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFAP04085 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.44□□□□□ -0.1
PDGFAP04085 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFAP04085 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PDGFAP04085 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.44□□□□□ -0.1
PDGFAP04085 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.44□□□□□ -0.1
PDGFAP04085 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.44□□□□□ -0.1
PDGFAP04085 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDGFAP04085 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms