RNA–Protein interactions for RNA: ENST00000422242.1

RAB5A-203, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5A, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-203ENST00000422242 CHIC1Q5VXU3 224 aa35.1■■■■□ 3.21
RAB5A-203ENST00000422242 AEBP2Q6ZN18 517 aaPredicted RBP34.75■■■■□ 3.15
RAB5A-203ENST00000422242 PHF23Q9BUL5 403 aaPredicted RBP31.07■■■□□ 2.57
RAB5A-203ENST00000422242 SENP3Q9H4L4 574 aaPredicted RBP29.19■■■□□ 2.26
RAB5A-203ENST00000422242 PLPPR3Q6T4P5 718 aa29.05■■■□□ 2.24
RAB5A-203ENST00000422242 ADRA2BP18089 450 aa27.29■■□□□ 1.96
RAB5A-203ENST00000422242 PPP6R1Q9UPN7 881 aa27.03■■□□□ 1.92
RAB5A-203ENST00000422242 FOXD1Q16676 465 aa26.99■■□□□ 1.91
RAB5A-203ENST00000422242 KCNA4P22459 653 aa26.71■■□□□ 1.87
RAB5A-203ENST00000422242 EHMT2Q96KQ7 1210 aa26.44■■□□□ 1.82
RAB5A-203ENST00000422242 PPP4R3CPQ6ZMV5 832 aa25.8■■□□□ 1.72
RAB5A-203ENST00000422242 PIAS4Q8N2W9 510 aaPredicted RBP25.77■■□□□ 1.72
RAB5A-203ENST00000422242 SLC4A1APQ9BWU0 796 aaKnown RBP25.63■■□□□ 1.69
RAB5A-203ENST00000422242 CSRNP3Q8WYN3 585 aa25.49■■□□□ 1.67
RAB5A-203ENST00000422242 NCBP3Q53F19 620 aaKnown RBP25.44■■□□□ 1.66
RAB5A-203ENST00000422242 NPM3O75607 178 aaKnown RBP25.14■■□□□ 1.62
RAB5A-203ENST00000422242 NISCHQ9Y2I1 1504 aa24.88■■□□□ 1.57
RAB5A-203ENST00000422242 CNKSR2Q8WXI2 1034 aa24.76■■□□□ 1.55
RAB5A-203ENST00000422242 SCAF1Q9H7N4 1312 aaKnown RBP24.64■■□□□ 1.54
RAB5A-203ENST00000422242 ZBTB22O15209 634 aa24.62■■□□□ 1.53
RAB5A-203ENST00000422242 MSH5O43196 834 aa24.31■■□□□ 1.48
RAB5A-203ENST00000422242 MAPK8IP2Q13387 824 aaPredicted RBP24.21■■□□□ 1.47
RAB5A-203ENST00000422242 FOXD4L1Q9NU39 408 aa24.14■■□□□ 1.45
RAB5A-203ENST00000422242 DNAJC5BQ9UF47 199 aa24.09■■□□□ 1.45
RAB5A-203ENST00000422242 RNF216Q9NWF9 866 aaPredicted RBP23.95■■□□□ 1.42
RAB5A-203ENST00000422242 HOXD11P31277 338 aaPredicted RBP23.51■■□□□ 1.35
RAB5A-203ENST00000422242 DMRT2Q9Y5R5 561 aa23.51■■□□□ 1.35
RAB5A-203ENST00000422242 SLC4A2P04920 1241 aa23.44■■□□□ 1.34
RAB5A-203ENST00000422242 RTN4Q9NQC3 1192 aaKnown RBP23.2■■□□□ 1.3
RAB5A-203ENST00000422242 MYCNP04198 464 aaPredicted RBP23.15■■□□□ 1.3
RAB5A-203ENST00000422242 ATXN8OSP0DMR3 200 aa23.13■■□□□ 1.29
RAB5A-203ENST00000422242 AMER1Q5JTC6 1135 aaPredicted RBP23.11■■□□□ 1.29
RAB5A-203ENST00000422242 SLC24A1O60721 1099 aa22.99■■□□□ 1.27
RAB5A-203ENST00000422242 FKBP8Q14318 412 aa22.98■■□□□ 1.27
RAB5A-203ENST00000422242 ATF5Q9Y2D1 282 aaPredicted RBP22.55■■□□□ 1.2
RAB5A-203ENST00000422242 DCAF8L1A6NGE4 600 aa22.51■■□□□ 1.19
RAB5A-203ENST00000422242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.47■■□□□ 1.19
RAB5A-203ENST00000422242 SAMD1Q6SPF0 538 aaPredicted RBP22.31■■□□□ 1.16
RAB5A-203ENST00000422242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.31■■□□□ 1.16
RAB5A-203ENST00000422242 HNRNPUL2Q1KMD3 747 aaKnown RBP22.31■■□□□ 1.16
RAB5A-203ENST00000422242 U3KPZ7 1027 aaPredicted RBP22.24■■□□□ 1.15
RAB5A-203ENST00000422242 CCDC180Q9P1Z9 1646 aa22.02■■□□□ 1.11
RAB5A-203ENST00000422242 ZNF219Q9P2Y4 722 aaPredicted RBP21.97■■□□□ 1.11
RAB5A-203ENST00000422242 APLP2Q06481 763 aa21.74■■□□□ 1.07
RAB5A-203ENST00000422242 FBXO3Q9UK99 471 aa21.72■■□□□ 1.07
RAB5A-203ENST00000422242 SPDYE4A6NLX3 237 aa21.71■■□□□ 1.07
RAB5A-203ENST00000422242 MKRN4PQ13434 485 aaPredicted RBP21.6■■□□□ 1.05
RAB5A-203ENST00000422242 PROM2Q8N271 834 aa21.48■■□□□ 1.03
RAB5A-203ENST00000422242 VASPP50552 380 aaPredicted RBP21.45■■□□□ 1.02
RAB5A-203ENST00000422242 FBLN2P98095 1184 aa21.41■■□□□ 1.02
RAB5A-203ENST00000422242 TRHP20396 242 aaPredicted RBP21.34■■□□□ 1.01
RAB5A-203ENST00000422242 PLCB2Q00722 1185 aa21.34■■□□□ 1.01
RAB5A-203ENST00000422242 SPINK5Q9NQ38 1064 aaPredicted RBP21.29■■□□□ 1
RAB5A-203ENST00000422242 IFNLR1Q8IU57 520 aaPredicted RBP21.28■■□□□ 1
RAB5A-203ENST00000422242 POLA2Q14181 598 aa21.27■■□□□ 1
RAB5A-203ENST00000422242 DCAF8L2P0C7V8 631 aa21.19■□□□□ 0.98
RAB5A-203ENST00000422242 CAPN15O75808 1086 aa21.12■□□□□ 0.97
RAB5A-203ENST00000422242 HAP1P54257 671 aaPredicted RBP21.08■□□□□ 0.97
RAB5A-203ENST00000422242 PKD2Q13563 968 aa21.06■□□□□ 0.96
RAB5A-203ENST00000422242 RNF39Q9H2S5 420 aa21■□□□□ 0.95
RAB5A-203ENST00000422242 ZBTB12Q9Y330 459 aaPredicted RBP20.91■□□□□ 0.94
RAB5A-203ENST00000422242 ABCC9O60706 1549 aa20.9■□□□□ 0.94
RAB5A-203ENST00000422242 ABCB7O75027 752 aa20.87■□□□□ 0.93
RAB5A-203ENST00000422242 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
RAB5A-203ENST00000422242 KLHL34Q8N239 644 aa20.8■□□□□ 0.92
RAB5A-203ENST00000422242 C1QBPQ07021 282 aaKnown RBP20.78■□□□□ 0.92
RAB5A-203ENST00000422242 SPOCK2Q92563 424 aa20.77■□□□□ 0.91
RAB5A-203ENST00000422242 VSIG10Q8N0Z9 540 aa20.71■□□□□ 0.91
RAB5A-203ENST00000422242 BCANQ96GW7 911 aa20.7■□□□□ 0.9
RAB5A-203ENST00000422242 ECM2O94769 699 aaPredicted RBP20.69■□□□□ 0.9
RAB5A-203ENST00000422242 DCAF1Q9Y4B6 1507 aa20.68■□□□□ 0.9
RAB5A-203ENST00000422242 ZNF692Q9BU19 519 aaPredicted RBP20.65■□□□□ 0.9
RAB5A-203ENST00000422242 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.62■□□□□ 0.89
RAB5A-203ENST00000422242 BBXQ8WY36 941 aaPredicted RBP20.61■□□□□ 0.89
RAB5A-203ENST00000422242 STAG3Q9UJ98 1225 aa20.61■□□□□ 0.89
RAB5A-203ENST00000422242 MYO15BQ96JP2 1530 aa20.61■□□□□ 0.89
RAB5A-203ENST00000422242 NPM1P06748 294 aaKnown RBP eCLIP20.59■□□□□ 0.89
RAB5A-203ENST00000422242 PLCD3Q8N3E9 789 aa20.57■□□□□ 0.88
RAB5A-203ENST00000422242 NACADO15069 1562 aa20.53■□□□□ 0.88
RAB5A-203ENST00000422242 PAXIP1Q6ZW49 1069 aaPredicted RBP20.53■□□□□ 0.88
RAB5A-203ENST00000422242 PRKCSHP14314 528 aaPredicted RBP20.52■□□□□ 0.87
RAB5A-203ENST00000422242 OSCARQ8IYS5 282 aa20.51■□□□□ 0.87
RAB5A-203ENST00000422242 SPDYE2BA6NHP3 402 aa20.49■□□□□ 0.87
RAB5A-203ENST00000422242 SPDYE6P0CI01 402 aa20.49■□□□□ 0.87
RAB5A-203ENST00000422242 SPDYE2Q495Y8 402 aa20.49■□□□□ 0.87
RAB5A-203ENST00000422242 RGL2O15211 777 aa20.48■□□□□ 0.87
RAB5A-203ENST00000422242 CFAP44Q96MT7 982 aa20.48■□□□□ 0.87
RAB5A-203ENST00000422242 KDM2AQ9Y2K7 1162 aa20.48■□□□□ 0.87
RAB5A-203ENST00000422242 SSUH2Q9Y2M2 353 aa20.48■□□□□ 0.87
RAB5A-203ENST00000422242 TAOK2Q9UL54 1235 aa20.45■□□□□ 0.86
RAB5A-203ENST00000422242 MIER1Q8N108 512 aa20.44■□□□□ 0.86
RAB5A-203ENST00000422242 DSG3P32926 999 aa20.44■□□□□ 0.86
RAB5A-203ENST00000422242 PABPN1Q86U42 306 aaKnown RBP eCLIP20.44■□□□□ 0.86
RAB5A-203ENST00000422242 RB1CC1Q8TDY2 1594 aa20.43■□□□□ 0.86
RAB5A-203ENST00000422242 SPRYD3Q8NCJ5 442 aa20.29■□□□□ 0.84
RAB5A-203ENST00000422242 CIZ1Q9ULV3 898 aaPredicted RBP20.28■□□□□ 0.84
RAB5A-203ENST00000422242 TSHZ2Q9NRE2 1034 aa20.23■□□□□ 0.83
RAB5A-203ENST00000422242 CHGAP10645 457 aaKnown RBP20.2■□□□□ 0.82
RAB5A-203ENST00000422242 PLEKHG5O94827 1062 aa20.18■□□□□ 0.82
RAB5A-203ENST00000422242 TPRNQ4KMQ1 711 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms